Unsupervised fuzzy binning of metagenomic sequence fragments on three-dimensional Barnes-Hut t-Stochastic Neighbor Embeddings

Shotgun metagenomic studies attempt to reconstruct population genome sequences from complex microbial communities. In some traditional genome demarcation approaches, high-dimensional sequence data are embedded into two-dimensional spaces and subsequently binned into candidate genomic populations. On...

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Bibliographic Details

Published in:	Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference Vol. 2018; pp. 1315 - 1318
Main Authors:	Ariza-Jimenez, Leandro, Quintero, O. L., Pinel, Nicolas
Format:	Conference Proceeding Journal Article
Language:	English
Published:	United States IEEE 01.07.2018
Subjects:	Bioinformatics Clustering algorithms Dimensionality reduction Genomics Indexes Sociology
ISSN:	1557-170X, 2694-0604, 1558-4615, 2694-0604
Online Access:	Get full text
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