RnBeads 2.0: comprehensive analysis of DNA methylation data

DNA methylation is a widely investigated epigenetic mark with important roles in development and disease. High-throughput assays enable genome-scale DNA methylation analysis in large numbers of samples. Here, we describe a new version of our RnBeads software - an R/Bioconductor package that implemen...

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Vydané v:	Genome Biology Ročník 20; číslo 1; s. 55
Hlavní autori:	Müller, Fabian, Scherer, Michael, Assenov, Yassen, Lutsik, Pavlo, Walter, Jörn, Lengauer, Thomas, Bock, Christoph
Médium:	Journal Article
Jazyk:	English
Vydavateľské údaje:	London BioMed Central 14.03.2019 Springer Nature B.V BMC
Predmet:	Adolescent Adult Age Factors Aged Aged, 80 and over Animal Genetics and Genomics Bioinformatics Biomarkers, Tumor - genetics Biomedical and Life Sciences Bisulfite Bisulfite sequencing bisulfites Cancer cell differentiation Child Computational Biology - methods Computational epigenetics Computer applications computer software Data analysis Data processing Datasets Deoxyribonucleic acid DNA DNA Methylation DNA microarrays Embryonic Stem Cells - cytology Embryonic Stem Cells - metabolism Epigenetics Epigenome-wide association studies Epigenomics Epigenotyping microarrays Evolutionary Biology Female genome Genome, Human Genomes High-Throughput Nucleotide Sequencing Human Genetics Humans Integrative data analysis Life Sciences Male microarray technology Microbial Genetics and Genomics Middle Aged Neoplasms - genetics Plant Genetics and Genomics Sequence Analysis, DNA - methods Sex Factors Software Software packages User interface Young Adult Integrative data analysis R/Bioconductor package Bisulfite sequencing DNA methylation Epigenotyping microarrays Epigenome-wide association studies Computational epigenetics Bioinformatics software tool
ISSN:	1474-760X, 1474-7596, 1474-760X
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