Panpipes: a pipeline for multiomic single-cell and spatial transcriptomic data analysis

Single-cell multiomic analysis of the epigenome, transcriptome, and proteome allows for comprehensive characterization of the molecular circuitry that underpins cell identity and state. However, the holistic interpretation of such datasets presents a challenge given a paucity of approaches for syste...

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Bibliographic Details
Published in:	Genome Biology Vol. 25; no. 1; p. 181
Main Authors:	Curion, Fabiola, Rich-Griffin, Charlotte, Agarwal, Devika, Ouologuem, Sarah, Rue-Albrecht, Kevin, May, Lilly, Garcia, Giulia E. L., Heumos, Lukas, Thomas, Tom, Lason, Wojciech, Sims, David, Theis, Fabian J., Dendrou, Calliope A.
Format:	Journal Article
Language:	English
Published:	London BioMed Central 08.07.2024 Springer Nature B.V BMC
Subjects:	Animal Genetics and Genomics Automation Best practice Bioinformatics Biomedical and Life Sciences Clustering Data analysis data collection Datasets Decision making epigenome Evolutionary Biology Gene Expression Profiling - methods Genomics Human Genetics Humans Life Sciences Metadata Microbial Genetics and Genomics Plant Genetics and Genomics proteome Proteomes Quality control Sensory integration Single-Cell Analysis - methods Software Transcriptome Transcriptomes Transcriptomics Workflow
ISSN:	1474-760X, 1474-7596, 1474-760X
Online Access:	Get full text
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