Comparison of multiple algorithms to reliably detect structural variants in pears

Background Structural variations (SVs) have been reported to play an important role in genetic diversity and trait regulation. Many computer algorithms detecting SVs have recently been developed, but the use of multiple algorithms to detect high-confidence SVs has not been studied. The most suitable...

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Bibliographic Details
Published in:	BMC genomics Vol. 21; no. 1; pp. 61 - 15
Main Authors:	Liu, Yueyuan, Zhang, Mingyue, Sun, Jieying, Chang, Wenjing, Sun, Manyi, Zhang, Shaoling, Wu, Jun
Format:	Journal Article
Language:	English
Published:	London BioMed Central 20.01.2020 BioMed Central Ltd Springer Nature B.V BMC
Subjects:	Accuracy of SVs Algorithms Animal Genetics and Genomics Biodiversity Biomedical and Life Sciences Chromosomes Comparative analysis Computer programs Cultivars Domestication Evolution Fruits Gene expression Genetic diversity Genomes Genomics Laws, regulations and rules Life Sciences Long-read sequencing Microarrays Microbial Genetics and Genomics Next-generation sequencing NGS Pears Plant Genetics and Genomics Plant genomics Proteomics Research Article Sequencing depth Software Software packages SV calling pipeline SV detection Iran China Long-read sequencing Accuracy of SVs SV detection NGS SV calling pipeline Sequencing depth
ISSN:	1471-2164, 1471-2164
Online Access:	Get full text
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