VDJtools: Unifying Post-analysis of T Cell Receptor Repertoires

Despite the growing number of immune repertoire sequencing studies, the field still lacks software for analysis and comprehension of this high-dimensional data. Here we report VDJtools, a complementary software suite that solves a wide range of T cell receptor (TCR) repertoires post-analysis tasks,...

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Bibliographic Details
Published in:	PLoS computational biology Vol. 11; no. 11; p. e1004503
Main Authors:	Shugay, Mikhail, Bagaev, Dmitriy V., Turchaninova, Maria A., Bolotin, Dmitriy A., Britanova, Olga V., Putintseva, Ekaterina V., Pogorelyy, Mikhail V., Nazarov, Vadim I., Zvyagin, Ivan V., Kirgizova, Vitalina I., Kirgizov, Kirill I., Skorobogatova, Elena V., Chudakov, Dmitriy M.
Format:	Journal Article
Language:	English
Published:	United States Public Library of Science 01.11.2015 Public Library of Science (PLoS)
Subjects:	Adolescent Adult Aging Analysis Antigen receptors, T cell Antigens Child Cluster Analysis Computational Biology - methods Genetic aspects Genomics Hematopoietic Stem Cell Transplantation Humans Lymphocytes Multiple sclerosis Multiple Sclerosis - genetics Physiological aspects Receptors Receptors, Antigen, T-Cell - chemistry Receptors, Antigen, T-Cell - genetics Receptors, Antigen, T-Cell - metabolism Sequence Analysis, DNA - methods Similarity measures Software Software packages Studies T cell receptors T cells Twins - genetics Young Adult Russia
ISSN:	1553-7358, 1553-734X, 1553-7358
Online Access:	Get full text
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