Automatic Sleep Stage Scoring Using Time-Frequency Analysis and Stacked Sparse Autoencoders

We developed a machine learning methodology for automatic sleep stage scoring. Our time-frequency analysis-based feature extraction is fine-tuned to capture sleep stage-specific signal features as described in the American Academy of Sleep Medicine manual that the human experts follow. We used ensem...

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Vydané v:	Annals of biomedical engineering Ročník 44; číslo 5; s. 1587 - 1597
Hlavní autori:	Tsinalis, Orestis, Matthews, Paul M., Guo, Yike
Médium:	Journal Article
Jazyk:	English
Vydavateľské údaje:	New York Springer US 01.05.2016 Springer Nature B.V
Predmet:	Accuracy Adult Automation Biochemistry Biological and Medical Physics Biomedical and Life Sciences Biomedical Engineering and Bioengineering Biomedicine Biophysics Channels Classical Mechanics Classification Databases, Factual Electroencephalography - instrumentation Electroencephalography - methods Female Frequency analysis Humans Machine Learning Male Manuals Mathematical models Scoring Signal Processing, Computer-Assisted Sleep Sleep Stages Young adults Deep learning Electroencephalography Ensemble learning EEG
ISSN:	0090-6964, 1573-9686, 1573-9686
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Popis
Shrnutí:	We developed a machine learning methodology for automatic sleep stage scoring. Our time-frequency analysis-based feature extraction is fine-tuned to capture sleep stage-specific signal features as described in the American Academy of Sleep Medicine manual that the human experts follow. We used ensemble learning with an ensemble of stacked sparse autoencoders for classifying the sleep stages. We used class-balanced random sampling across sleep stages for each model in the ensemble to avoid skewed performance in favor of the most represented sleep stages, and addressed the problem of misclassification errors due to class imbalance while significantly improving worst-stage classification. We used an openly available dataset from 20 healthy young adults for evaluation. We used a single channel of EEG from this dataset, which makes our method a suitable candidate for longitudinal monitoring using wearable EEG in real-world settings. Our method has both high overall accuracy (78%, range 75–80%), and high mean F 1 -score (84%, range 82–86%) and mean accuracy across individual sleep stages (86%, range 84–88%) over all subjects. The performance of our method appears to be uncorrelated with the sleep efficiency and percentage of transitional epochs in each recording.
Bibliografia:	ObjectType-Article-1 SourceType-Scholarly Journals-1 ObjectType-Feature-2 content type line 14 ObjectType-Article-2 ObjectType-Undefined-1 ObjectType-Feature-3 content type line 23 Associate Editor Leonidas D Iasemidis oversaw the review of this article.
ISSN:	0090-6964 1573-9686 1573-9686
DOI:	10.1007/s10439-015-1444-y