An algorithm to enumerate all possible protein conformations verifying a set of distance constraints

Background The determination of protein structures satisfying distance constraints is an important problem in structural biology. Whereas the most common method currently employed is simulated annealing, there have been other methods previously proposed in the literature. Most of them, however, are...

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Bibliographic Details
Published in:	BMC bioinformatics Vol. 16; no. 1; p. 23
Main Authors:	Cassioli, Andrea, Bardiaux, Benjamin, Bouvier, Guillaume, Mucherino, Antonio, Alves, Rafael, Liberti, Leo, Nilges, Michael, Lavor, Carlile, Malliavin, Thérèse E
Format:	Journal Article
Language:	English
Published:	London BioMed Central 28.01.2015 BioMed Central Ltd
Subjects:	Algorithms Analysis Biochemistry, Molecular Biology Bioinformatics Biomedical and Life Sciences Computational Biology - methods Computational Biology/Bioinformatics Computer Appl. in Life Sciences Computer Simulation Humans Life Sciences Methodology Methodology Article Microarrays Models, Molecular Molecular biology Peptide Fragments - chemistry Protein Conformation Proteins - chemistry Molecular conformation Distance geometry Nuclear magnetic resonance Branch-and-prune algorithm Protein structure branch-and-prune algorithm Nuclear Magnetic Resonance 1 2
ISSN:	1471-2105, 1471-2105
Online Access:	Get full text
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