Genome sequence and characterization of Streptomyces phage Pablito, representing a new species within the genus Janusvirus
Streptomycetes are ubiquitous soil bacteria. Here we report the complete and annotated genome sequence and characterization of Streptomyces phage Pablito, isolated from a soil sample in Haarlem, the Netherlands using Streptomyces lividans as host. This phage was able to infect a diverse range of Str...
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| Veröffentlicht in: | Scientific reports Jg. 12; H. 1; S. 17785 - 6 |
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22.10.2022
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| Abstract | Streptomycetes are ubiquitous soil bacteria. Here we report the complete and annotated genome sequence and characterization of
Streptomyces
phage Pablito, isolated from a soil sample in Haarlem, the Netherlands using
Streptomyces lividans
as host. This phage was able to infect a diverse range of
Streptomyces
strains, but none belonging to the sister genus
Kitasatospora
. Phage Pablito has double-stranded DNA with a genome length of 49,581 base pairs encoding 76 putative proteins, of which 26 could be predicted. The presence of a serine integrase protein indicated the lysogenic nature of phage Pablito. The phage remained stable over a wide range of temperatures (25–45 °C) and at pH ≥ 7.0, but lost infectivity at temperatures above 55 °C or when the pH dropped below 6.0. This newly isolated phage is closely related to
Streptomyces
phage Janus and Hank144 and considered a new species classified in the genus
Janusvirus
, within the subfamily
Arquattrovirinae
. |
|---|---|
| AbstractList | Streptomycetes are ubiquitous soil bacteria. Here we report the complete and annotated genome sequence and characterization of Streptomyces phage Pablito, isolated from a soil sample in Haarlem, the Netherlands using Streptomyces lividans as host. This phage was able to infect a diverse range of Streptomyces strains, but none belonging to the sister genus Kitasatospora. Phage Pablito has double-stranded DNA with a genome length of 49,581 base pairs encoding 76 putative proteins, of which 26 could be predicted. The presence of a serine integrase protein indicated the lysogenic nature of phage Pablito. The phage remained stable over a wide range of temperatures (25–45 °C) and at pH ≥ 7.0, but lost infectivity at temperatures above 55 °C or when the pH dropped below 6.0. This newly isolated phage is closely related to Streptomyces phage Janus and Hank144 and considered a new species classified in the genus Janusvirus, within the subfamily Arquattrovirinae. Streptomycetes are ubiquitous soil bacteria. Here we report the complete and annotated genome sequence and characterization of Streptomyces phage Pablito, isolated from a soil sample in Haarlem, the Netherlands using Streptomyces lividans as host. This phage was able to infect a diverse range of Streptomyces strains, but none belonging to the sister genus Kitasatospora . Phage Pablito has double-stranded DNA with a genome length of 49,581 base pairs encoding 76 putative proteins, of which 26 could be predicted. The presence of a serine integrase protein indicated the lysogenic nature of phage Pablito. The phage remained stable over a wide range of temperatures (25–45 °C) and at pH ≥ 7.0, but lost infectivity at temperatures above 55 °C or when the pH dropped below 6.0. This newly isolated phage is closely related to Streptomyces phage Janus and Hank144 and considered a new species classified in the genus Janusvirus , within the subfamily Arquattrovirinae . Streptomycetes are ubiquitous soil bacteria. Here we report the complete and annotated genome sequence and characterization of Streptomyces phage Pablito, isolated from a soil sample in Haarlem, the Netherlands using Streptomyces lividans as host. This phage was able to infect a diverse range of Streptomyces strains, but none belonging to the sister genus Kitasatospora. Phage Pablito has double-stranded DNA with a genome length of 49,581 base pairs encoding 76 putative proteins, of which 26 could be predicted. The presence of a serine integrase protein indicated the lysogenic nature of phage Pablito. The phage remained stable over a wide range of temperatures (25-45 °C) and at pH ≥ 7.0, but lost infectivity at temperatures above 55 °C or when the pH dropped below 6.0. This newly isolated phage is closely related to Streptomyces phage Janus and Hank144 and considered a new species classified in the genus Janusvirus, within the subfamily Arquattrovirinae. Abstract Streptomycetes are ubiquitous soil bacteria. Here we report the complete and annotated genome sequence and characterization of Streptomyces phage Pablito, isolated from a soil sample in Haarlem, the Netherlands using Streptomyces lividans as host. This phage was able to infect a diverse range of Streptomyces strains, but none belonging to the sister genus Kitasatospora. Phage Pablito has double-stranded DNA with a genome length of 49,581 base pairs encoding 76 putative proteins, of which 26 could be predicted. The presence of a serine integrase protein indicated the lysogenic nature of phage Pablito. The phage remained stable over a wide range of temperatures (25–45 °C) and at pH ≥ 7.0, but lost infectivity at temperatures above 55 °C or when the pH dropped below 6.0. This newly isolated phage is closely related to Streptomyces phage Janus and Hank144 and considered a new species classified in the genus Janusvirus, within the subfamily Arquattrovirinae. Streptomycetes are ubiquitous soil bacteria. Here we report the complete and annotated genome sequence and characterization of Streptomyces phage Pablito, isolated from a soil sample in Haarlem, the Netherlands using Streptomyces lividans as host. This phage was able to infect a diverse range of Streptomyces strains, but none belonging to the sister genus Kitasatospora. Phage Pablito has double-stranded DNA with a genome length of 49,581 base pairs encoding 76 putative proteins, of which 26 could be predicted. The presence of a serine integrase protein indicated the lysogenic nature of phage Pablito. The phage remained stable over a wide range of temperatures (25-45 °C) and at pH ≥ 7.0, but lost infectivity at temperatures above 55 °C or when the pH dropped below 6.0. This newly isolated phage is closely related to Streptomyces phage Janus and Hank144 and considered a new species classified in the genus Janusvirus, within the subfamily Arquattrovirinae.Streptomycetes are ubiquitous soil bacteria. Here we report the complete and annotated genome sequence and characterization of Streptomyces phage Pablito, isolated from a soil sample in Haarlem, the Netherlands using Streptomyces lividans as host. This phage was able to infect a diverse range of Streptomyces strains, but none belonging to the sister genus Kitasatospora. Phage Pablito has double-stranded DNA with a genome length of 49,581 base pairs encoding 76 putative proteins, of which 26 could be predicted. The presence of a serine integrase protein indicated the lysogenic nature of phage Pablito. The phage remained stable over a wide range of temperatures (25-45 °C) and at pH ≥ 7.0, but lost infectivity at temperatures above 55 °C or when the pH dropped below 6.0. This newly isolated phage is closely related to Streptomyces phage Janus and Hank144 and considered a new species classified in the genus Janusvirus, within the subfamily Arquattrovirinae. |
| ArticleNumber | 17785 |
| Author | Kropinski, Andrew M. Ongenae, Véronique Azeredo, Joana Rozen, Daniel Briegel, Ariane Claessen, Dennis |
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| References | Zhu (CR12) 2014; 160 Sumby, Smith (CR9) 2002; 44 Wellington, Stackebrandt, Sanders, Wolstrup, Jorgensen (CR18) 1992; 42 Garneau, Depardieu, Fortier, Bikard, Monot (CR14) 2017; 7 Fernández-Martínez (CR1) 2014; 58 Dowding (CR13) 1973; 76 Jones, Bradley (CR7) 1965; 40 Groth (CR17) 2004; 54 Dennehy, Abedon (CR22) 2021 Turner, Adriaenssens, Tolstoy, Kropinski (CR19) 2021; 2 Groth, Calos (CR21) 2004; 335 Kronheim (CR10) 2018; 564 Zheng, Li, Guan, Zhang, Tan (CR3) 2019; 103 Edgar (CR15) 2004; 32 de Pocópio, Reis, da Silva, Martins, Lúcio, de Azevedo, de Araújo (CR2) 2012; 16 Hwang, Kim, Charusanti, Palsson, Lee (CR4) 2014; 32 van Wezel, McDowall (CR5) 2011; 28 Alstyne, Otto, McCoy (CR6) 1955; 70 Hardy, Sharma, Kever, Frunzke (CR16) 2020; 12 Moraru, Varsani, Kropinski (CR20) 2020; 12 Ongenae (CR11) 2022 Hoskisson, Sumby, Smith (CR8) 2015; 477 LT Fernández-Martínez (22784_CR1) 2014; 58 I Groth (22784_CR17) 2004; 54 D Turner (22784_CR19) 2021; 2 AC Groth (22784_CR21) 2004; 335 GP van Wezel (22784_CR5) 2011; 28 K-S Hwang (22784_CR4) 2014; 32 LA Jones (22784_CR7) 1965; 40 P Sumby (22784_CR9) 2002; 44 A Hardy (22784_CR16) 2020; 12 J Dowding (22784_CR13) 1973; 76 S Kronheim (22784_CR10) 2018; 564 MHV Alstyne (22784_CR6) 1955; 70 JJ Dennehy (22784_CR22) 2021 J Zheng (22784_CR3) 2019; 103 EMH Wellington (22784_CR18) 1992; 42 PA Hoskisson (22784_CR8) 2015; 477 V Ongenae (22784_CR11) 2022 JR Garneau (22784_CR14) 2017; 7 RC Edgar (22784_CR15) 2004; 32 H Zhu (22784_CR12) 2014; 160 C Moraru (22784_CR20) 2020; 12 REL de Pocópio (22784_CR2) 2012; 16 |
| References_xml | – volume: 32 start-page: 255 year: 2014 end-page: 268 ident: CR4 article-title: Systems biology and biotechnology of species for the production of secondary metabolites publication-title: Biotechnol. Adv. doi: 10.1016/j.biotechadv.2013.10.008 – volume: 12 start-page: 1065 year: 2020 ident: CR16 article-title: Genome sequence and characterization of five bacteriophages infecting and and publication-title: Viruses doi: 10.3390/v12101065 – volume: 16 start-page: 466 year: 2012 end-page: 471 ident: CR2 article-title: Antibiotics produced by publication-title: Braz. J. Infect. Dis. doi: 10.1016/j.bjid.2012.08.014 – volume: 42 start-page: 156 year: 1992 end-page: 160 ident: CR18 article-title: Taxonomic status of , and proposed unification with on the basis of phenotypic and 16S rRNA analysis and emendation of and 1943, 339(AL) publication-title: Int. J. Syst. Bacteriol. doi: 10.1099/00207713-42-1-156 – volume: 564 start-page: 283 year: 2018 end-page: 286 ident: CR10 article-title: A chemical defence against phage infection publication-title: Nature doi: 10.1038/s41586-018-0767-x – volume: 54 start-page: 2121 year: 2004 end-page: 2129 ident: CR17 article-title: Five novel species from soil: sp. nov., sp. nov., sp. nov., sp., nov. and sp. nov publication-title: Int. J. Syst. Evolut. Microbiol. doi: 10.1099/ijs.0.63070-0 – volume: 70 start-page: 113 year: 1955 end-page: 119 ident: CR6 article-title: Characteristics of strains resistant to phage publication-title: J. Bacteriol. doi: 10.1128/jb.70.1.113-119.1955 – volume: 58 start-page: 7441 year: 2014 end-page: 7450 ident: CR1 article-title: New insights into chloramphenicol biosynthesis in ATCC 10712 publication-title: Antimicrob. Agents Chemother. doi: 10.1128/AAC.04272-14 – volume: 103 start-page: 2263 year: 2019 end-page: 2275 ident: CR3 article-title: Enhancement of neomycin production by engineering the entire biosynthetic gene cluster and feeding key precursors in CGMCC 4.576 publication-title: Appl. Microbiol. Biotechnol. doi: 10.1007/s00253-018-09597-8 – volume: 40 start-page: 191 year: 1965 end-page: 198 ident: CR7 article-title: The life-cycle of an actinophage for publication-title: Microbiology – volume: 32 start-page: 1792 year: 2004 end-page: 1797 ident: CR15 article-title: MUSCLE: Multiple sequence alignment with high accuracy and high throughput publication-title: Nucleic Acids Res. doi: 10.1093/nar/gkh340 – volume: 335 start-page: 667 year: 2004 end-page: 678 ident: CR21 article-title: Phage integrases: Biology and applications publication-title: J. Mol. Biol. doi: 10.1016/j.jmb.2003.09.082 – volume: 28 start-page: 1311 year: 2011 end-page: 1333 ident: CR5 article-title: The regulation of the secondary metabolism of : New links and experimental advances publication-title: Nat. Prod. Rep. doi: 10.1039/c1np00003a – volume: 76 start-page: 163 year: 1973 end-page: 176 ident: CR13 article-title: Characterization of a bacteriophage virulent for A3 (2) publication-title: Microbiology – volume: 12 start-page: 1268 year: 2020 ident: CR20 article-title: VIRIDIC—A novel tool to calculate the intergenomic similarities of prokaryote-infecting viruses publication-title: Viruses doi: 10.3390/v12111268 – volume: 44 start-page: 489 year: 2002 end-page: 500 ident: CR9 article-title: Genetics of the phage growth limitation (Pgl) system of A3 (2) publication-title: Mol. Microbiol. doi: 10.1046/j.1365-2958.2002.02896.x – volume: 477 start-page: 100 year: 2015 end-page: 109 ident: CR8 article-title: The phage growth limitation system in A (3) 2 is a toxin/antitoxin system, comprising enzymes with DNA methyltransferase, protein kinase and ATPase activity publication-title: Virology doi: 10.1016/j.virol.2014.12.036 – year: 2022 ident: CR11 article-title: Reversible bacteriophage resistance by shedding the bacterial cell wall publication-title: Open Biol. doi: 10.1098/rsob.210379 – volume: 7 start-page: 1 year: 2017 end-page: 10 ident: CR14 article-title: PhageTerm: A tool for fast and accurate determination of phage termini and packaging mechanism using next-generation sequencing data publication-title: Sci. Rep. doi: 10.1038/s41598-017-07910-5 – volume: 160 start-page: 1714 year: 2014 end-page: 1726 ident: CR12 article-title: Eliciting antibiotics active against the ESKAPE pathogens in a collection of actinomycetes isolated from mountain soils publication-title: Microbiology doi: 10.1099/mic.0.078295-0 – year: 2021 ident: CR22 article-title: Phage infection and lysis publication-title: Bacteriophages Biol., Technol. Ther. doi: 10.1007/978-3-319-41986-2_53 – volume: 2 start-page: 170 year: 2021 end-page: 182 ident: CR19 article-title: Phage annotation guide: Guidelines for assembly and high-quality annotation publication-title: PHAGE doi: 10.1089/phage.2021.0013 – volume: 58 start-page: 7441 year: 2014 ident: 22784_CR1 publication-title: Antimicrob. Agents Chemother. doi: 10.1128/AAC.04272-14 – volume: 40 start-page: 191 year: 1965 ident: 22784_CR7 publication-title: Microbiology – volume: 32 start-page: 1792 year: 2004 ident: 22784_CR15 publication-title: Nucleic Acids Res. doi: 10.1093/nar/gkh340 – volume: 2 start-page: 170 year: 2021 ident: 22784_CR19 publication-title: PHAGE doi: 10.1089/phage.2021.0013 – volume: 54 start-page: 2121 year: 2004 ident: 22784_CR17 publication-title: Int. J. Syst. Evolut. Microbiol. doi: 10.1099/ijs.0.63070-0 – volume: 44 start-page: 489 year: 2002 ident: 22784_CR9 publication-title: Mol. Microbiol. doi: 10.1046/j.1365-2958.2002.02896.x – volume: 42 start-page: 156 year: 1992 ident: 22784_CR18 publication-title: Int. J. Syst. Bacteriol. doi: 10.1099/00207713-42-1-156 – volume: 76 start-page: 163 year: 1973 ident: 22784_CR13 publication-title: Microbiology – year: 2022 ident: 22784_CR11 publication-title: Open Biol. doi: 10.1098/rsob.210379 – volume: 12 start-page: 1065 year: 2020 ident: 22784_CR16 publication-title: Viruses doi: 10.3390/v12101065 – volume: 7 start-page: 1 year: 2017 ident: 22784_CR14 publication-title: Sci. Rep. doi: 10.1038/s41598-017-07910-5 – volume: 16 start-page: 466 year: 2012 ident: 22784_CR2 publication-title: Braz. J. Infect. Dis. doi: 10.1016/j.bjid.2012.08.014 – volume: 12 start-page: 1268 year: 2020 ident: 22784_CR20 publication-title: Viruses doi: 10.3390/v12111268 – volume: 32 start-page: 255 year: 2014 ident: 22784_CR4 publication-title: Biotechnol. Adv. doi: 10.1016/j.biotechadv.2013.10.008 – volume: 70 start-page: 113 year: 1955 ident: 22784_CR6 publication-title: J. Bacteriol. doi: 10.1128/jb.70.1.113-119.1955 – volume: 477 start-page: 100 year: 2015 ident: 22784_CR8 publication-title: Virology doi: 10.1016/j.virol.2014.12.036 – volume: 564 start-page: 283 year: 2018 ident: 22784_CR10 publication-title: Nature doi: 10.1038/s41586-018-0767-x – volume: 28 start-page: 1311 year: 2011 ident: 22784_CR5 publication-title: Nat. Prod. Rep. doi: 10.1039/c1np00003a – volume: 335 start-page: 667 year: 2004 ident: 22784_CR21 publication-title: J. Mol. Biol. doi: 10.1016/j.jmb.2003.09.082 – volume: 103 start-page: 2263 year: 2019 ident: 22784_CR3 publication-title: Appl. Microbiol. Biotechnol. doi: 10.1007/s00253-018-09597-8 – year: 2021 ident: 22784_CR22 publication-title: Bacteriophages Biol., Technol. Ther. doi: 10.1007/978-3-319-41986-2_53 – volume: 160 start-page: 1714 year: 2014 ident: 22784_CR12 publication-title: Microbiology doi: 10.1099/mic.0.078295-0 |
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| Snippet | Streptomycetes are ubiquitous soil bacteria. Here we report the complete and annotated genome sequence and characterization of
Streptomyces
phage Pablito,... Streptomycetes are ubiquitous soil bacteria. Here we report the complete and annotated genome sequence and characterization of Streptomyces phage Pablito,... Abstract Streptomycetes are ubiquitous soil bacteria. Here we report the complete and annotated genome sequence and characterization of Streptomyces phage... |
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| SubjectTerms | 631/326 631/326/325 631/326/432 Bacteria Bacteriophages - genetics Biology DNA, Viral - genetics Genomes Humanities and Social Sciences Infectivity Integrase Integrases Microscopy Morphology multidisciplinary New species Nucleotide sequence pH effects Phages Phylogenetics Proteins Science Science (multidisciplinary) Serine Soil Soil microorganisms Streptomyces Streptomyces - genetics |
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| Title | Genome sequence and characterization of Streptomyces phage Pablito, representing a new species within the genus Janusvirus |
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