igv.js: an embeddable JavaScript implementation of the Integrative Genomics Viewer (IGV)

Abstract Summary igv.js is an embeddable JavaScript implementation of the Integrative Genomics Viewer (IGV). It can be easily dropped into any web page with a single line of code and has no external dependencies. The viewer runs completely in the web browser, with no backend server and no data pre-p...

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Bibliographic Details
Published in:Bioinformatics (Oxford, England) Vol. 39; no. 1
Main Authors: Robinson, James T, Thorvaldsdottir, Helga, Turner, Douglass, Mesirov, Jill P
Format: Journal Article
Language:English
Published: England Oxford University Press 01.01.2023
Oxford Publishing Limited (England)
Subjects:
Applications Note
Availability
Bioinformatics
Genomics
Software
Source code
Web Browser
ISSN:1367-4811, 1367-4803, 1367-4811
Online Access:Get full text
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Description
Summary:Abstract Summary igv.js is an embeddable JavaScript implementation of the Integrative Genomics Viewer (IGV). It can be easily dropped into any web page with a single line of code and has no external dependencies. The viewer runs completely in the web browser, with no backend server and no data pre-processing required. Availability and implementation The igv.js JavaScript component can be installed from NPM at https://www.npmjs.com/package/igv. The source code is available at https://github.com/igvteam/igv.js under the MIT open-source license. IGV-Web, the end-user application built around igv.js, is available at https://igv.org/app. The source code is available at https://github.com/igvteam/igv-webapp under the MIT open-source license. Supplementary information Supplementary information is available at Bioinformatics online.
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ISSN:1367-4811
1367-4803
1367-4811
DOI:10.1093/bioinformatics/btac830