Inferring metabolic pathway activity levels from RNA-Seq data

Background Assessing pathway activity levels is a plausible way to quantify metabolic differences between various conditions. This is usually inferred from microarray expression data. Wide availability of NGS technology has triggered a demand for bioinformatics tools capable of analyzing pathway act...

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Vydané v:	BMC genomics Ročník 17; číslo Suppl 5; s. 542
Hlavní autori:	Temate-Tiagueu, Yvette, Seesi, Sahar Al, Mathew, Meril, Mandric, Igor, Rodriguez, Alex, Bean, Kayla, Cheng, Qiong, Glebova, Olga, Măndoiu, Ion, Lopanik, Nicole B., Zelikovsky, Alexander
Médium:	Journal Article
Jazyk:	English
Vydavateľské údaje:	London BioMed Central 31.08.2016 BioMed Central Ltd
Predmet:	Animal Genetics and Genomics Animals Biomedical and Life Sciences Bryozoa - genetics Bryozoa - metabolism Computational Biology Gene expression Life Sciences Metabolic Networks and Pathways Microarrays Microbial Genetics and Genomics Observations Plant Genetics and Genomics Proteomics RNA sequencing Sequence Analysis, RNA Software Symbiosis Transcriptome Differential Expression Analysis Permutation Model Pathway Activity Pathway Graph Ortholog Group
ISSN:	1471-2164, 1471-2164
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