Partition function and base pairing probabilities for RNA–RNA interaction prediction

Motivation: The RNA–RNA interaction problem (RIP) consists in finding the energetically optimal structure of two RNA molecules that bind to each other. The standard model allows secondary structures in both partners as well as additional base pairs between the two RNAs subject to certain restriction...

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Vydané v:	Bioinformatics Ročník 25; číslo 20; s. 2646 - 2654
Hlavní autori:	Huang, Fenix W. D., Qin, Jing, Reidys, Christian M., Stadler, Peter F.
Médium:	Journal Article
Jazyk:	English
Vydavateľské údaje:	Oxford Oxford University Press 15.10.2009
Predmet:	Algorithms Base Pairing Biological and medical sciences Computational Biology - methods Databases, Genetic Fundamental and applied biological sciences. Psychology General aspects Mathematics in biology. Statistical analysis. Models. Metrology. Data processing in biology (general aspects) Nucleic Acid Conformation RNA - chemistry RNA - metabolism Thermodynamics Partition Partition function RNA Interaction Prediction Probability Base pairing
ISSN:	1367-4803, 1367-4811, 1460-2059, 1367-4811
On-line prístup:	Získať plný text
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