TIM-Finder: A new method for identifying TIM-barrel proteins

Background The triosephosphate isomerase (TIM)-barrel fold occurs frequently in the proteomes of different organisms, and the known TIM-barrel proteins have been found to play diverse functional roles. To accelerate the exploration of the sequence-structure protein landscape in the TIM-barrel fold,...

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Bibliographic Details
Published in:	BMC structural biology Vol. 9; no. 1; p. 73
Main Authors:	Si, Jing-Na, Yan, Ren-Xiang, Wang, Chuan, Zhang, Ziding, Su, Xiao-Dong
Format:	Journal Article
Language:	English
Published:	London BioMed Central 14.12.2009 BioMed Central Ltd
Subjects:	Amino Acid Motifs Bacillus subtilis - chemistry Biochemistry Bioinformatics Biomedical and Life Sciences Colleges & universities Computational Biology - methods Crystallography and Scattering Methods Databases, Nucleic Acid Genetic algorithms Identification systems Isoenzymes - analysis Isoenzymes - chemistry Isoenzymes - metabolism Life Sciences Mass Spectrometry Methodology Article Methods Models, Molecular Physiological aspects Programming languages Protein Folding Protein Science Protein Structure, Secondary Protein Structure, Tertiary Proteins Proteome - analysis Proteome - chemistry Proteome - metabolism Sequence Analysis, Protein Spectroscopy/Spectrometry Structure Triose-Phosphate Isomerase - analysis Triose-Phosphate Isomerase - chemistry Triose-Phosphate Isomerase - metabolism Triosephosphate isomerase Support Vector Machine Model Query Sequence Support Vector Machine Triosephosphate Isomerase Protein Pair
ISSN:	1472-6807, 1472-6807
Online Access:	Get full text
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