Using the longest run subsequence problem within homology-based scaffolding

Genome assembly is one of the most important problems in computational genomics. Here, we suggest addressing an issue that arises in homology-based scaffolding, that is, when linking and ordering contigs to obtain larger pseudo-chromosomes by means of a second incomplete assembly of a related specie...

Celý popis

Uloženo v:

Podrobná bibliografie
Vydáno v:	Algorithms for molecular biology Ročník 16; číslo 1; s. 1 - 11
Hlavní autoři:	Schrinner, Sven, Goel, Manish, Wulfert, Michael, Spohr, Philipp, Schneeberger, Korbinian, Klau, Gunnar W.
Médium:	Journal Article
Jazyk:	angličtina
Vydáno:	London BioMed Central 28.06.2021 Springer Nature B.V BMC
Témata:	Algorithms Alignment Assembly Bioinformatics Biomedical and Life Sciences Cellular and Medical Topics Chromosomes Computational Biology/Bioinformatics Computer applications Genomes Homology Life Sciences Linear programming Longest subsequence Mutation Physiological Scaffolding Selected papers from WABI 2020 Source code String algorithm String algorithm Alignment Longest subsequence Assembly
ISSN:	1748-7188, 1748-7188
On-line přístup:	Získat plný text
Tagy:	Přidat tag Žádné tagy, Buďte první, kdo vytvoří štítek k tomuto záznamu!

Buďte první, kdo okomentuje tento záznam!