NetCoMi: network construction and comparison for microbiome data in R

Abstract Motivation Estimating microbial association networks from high-throughput sequencing data is a common exploratory data analysis approach aiming at understanding the complex interplay of microbial communities in their natural habitat. Statistical network estimation workflows comprise several...

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Bibliographic Details
Published in:	Briefings in bioinformatics Vol. 22; no. 4
Main Authors:	Peschel, Stefanie, Müller, Christian L, von Mutius, Erika, Boulesteix, Anne-Laure, Depner, Martin
Format:	Journal Article
Language:	English
Published:	Oxford Oxford University Press 01.07.2021 Oxford Publishing Limited (England)
Subjects:	Associations Bioinformatics Computer applications Computer graphics Data analysis Estimation Heterogeneity Method Review Microbial activity Microbiomes Microorganisms Networks Next-generation sequencing Secondary analysis Software Statistical methods Workflow network analysis compositional data differential association network comparison sample similarity network microbial association estimation
ISSN:	1467-5463, 1477-4054, 1477-4054
Online Access:	Get full text
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