The Sequence Read Archive: a decade more of explosive growth

Abstract The Sequence Read Archive (SRA, https://www.ncbi.nlm.nih.gov/sra/) stores raw sequencing data and alignment information to enhance reproducibility and facilitate new discoveries through data analysis. Here we note changes in storage designed to increase access and highlight analyses that au...

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Vydané v:	Nucleic acids research Ročník 50; číslo D1; s. D387 - D390
Hlavní autori:	Katz, Kenneth, Shutov, Oleg, Lapoint, Richard, Kimelman, Michael, Brister, J Rodney, O’Sullivan, Christopher
Médium:	Journal Article
Jazyk:	English
Vydavateľské údaje:	England Oxford University Press 07.01.2022
Predmet:	Bacteria - classification Bacteria - genetics Base Sequence Database Issue Databases, Genetic High-Throughput Nucleotide Sequencing Internet Metadata - statistics & numerical data Phylogeny Reproducibility of Results SARS-CoV-2 - genetics Sequence Analysis, RNA Software Viruses - classification Viruses - genetics
ISSN:	0305-1048, 1362-4962, 1362-4962
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Abstract	Abstract The Sequence Read Archive (SRA, https://www.ncbi.nlm.nih.gov/sra/) stores raw sequencing data and alignment information to enhance reproducibility and facilitate new discoveries through data analysis. Here we note changes in storage designed to increase access and highlight analyses that augment metadata with taxonomic insight to help users select data. In addition, we present three unanticipated applications of taxonomic analysis.
AbstractList	The Sequence Read Archive (SRA, https://www.ncbi.nlm.nih.gov/sra/) stores raw sequencing data and alignment information to enhance reproducibility and facilitate new discoveries through data analysis. Here we note changes in storage designed to increase access and highlight analyses that augment metadata with taxonomic insight to help users select data. In addition, we present three unanticipated applications of taxonomic analysis.The Sequence Read Archive (SRA, https://www.ncbi.nlm.nih.gov/sra/) stores raw sequencing data and alignment information to enhance reproducibility and facilitate new discoveries through data analysis. Here we note changes in storage designed to increase access and highlight analyses that augment metadata with taxonomic insight to help users select data. In addition, we present three unanticipated applications of taxonomic analysis. The Sequence Read Archive (SRA, https://www.ncbi.nlm.nih.gov/sra/) stores raw sequencing data and alignment information to enhance reproducibility and facilitate new discoveries through data analysis. Here we note changes in storage designed to increase access and highlight analyses that augment metadata with taxonomic insight to help users select data. In addition, we present three unanticipated applications of taxonomic analysis. Abstract The Sequence Read Archive (SRA, https://www.ncbi.nlm.nih.gov/sra/) stores raw sequencing data and alignment information to enhance reproducibility and facilitate new discoveries through data analysis. Here we note changes in storage designed to increase access and highlight analyses that augment metadata with taxonomic insight to help users select data. In addition, we present three unanticipated applications of taxonomic analysis.
Author	Kimelman, Michael Lapoint, Richard Brister, J Rodney Katz, Kenneth Shutov, Oleg O’Sullivan, Christopher
Author_xml	– sequence: 1 givenname: Kenneth orcidid: 0000-0002-9134-4559 surname: Katz fullname: Katz, Kenneth email: kskatz@nih.gov – sequence: 2 givenname: Oleg surname: Shutov fullname: Shutov, Oleg – sequence: 3 givenname: Richard surname: Lapoint fullname: Lapoint, Richard – sequence: 4 givenname: Michael surname: Kimelman fullname: Kimelman, Michael – sequence: 5 givenname: J Rodney surname: Brister fullname: Brister, J Rodney – sequence: 6 givenname: Christopher surname: O’Sullivan fullname: O’Sullivan, Christopher
BackLink	https://www.ncbi.nlm.nih.gov/pubmed/34850094$$D View this record in MEDLINE/PubMed
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Snippet	Abstract The Sequence Read Archive (SRA, https://www.ncbi.nlm.nih.gov/sra/) stores raw sequencing data and alignment information to enhance reproducibility and... The Sequence Read Archive (SRA, https://www.ncbi.nlm.nih.gov/sra/) stores raw sequencing data and alignment information to enhance reproducibility and...
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SubjectTerms	Bacteria - classification Bacteria - genetics Base Sequence Database Issue Databases, Genetic High-Throughput Nucleotide Sequencing Internet Metadata - statistics & numerical data Phylogeny Reproducibility of Results SARS-CoV-2 - genetics Sequence Analysis, RNA Software Viruses - classification Viruses - genetics
Title	The Sequence Read Archive: a decade more of explosive growth
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