The Sequence Read Archive: a decade more of explosive growth

Abstract The Sequence Read Archive (SRA, https://www.ncbi.nlm.nih.gov/sra/) stores raw sequencing data and alignment information to enhance reproducibility and facilitate new discoveries through data analysis. Here we note changes in storage designed to increase access and highlight analyses that au...

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Vydáno v:Nucleic acids research Ročník 50; číslo D1; s. D387 - D390
Hlavní autoři: Katz, Kenneth, Shutov, Oleg, Lapoint, Richard, Kimelman, Michael, Brister, J Rodney, O’Sullivan, Christopher
Médium: Journal Article
Jazyk:angličtina
Vydáno: England Oxford University Press 07.01.2022
Témata:
Bacteria - classification
Bacteria - genetics
Base Sequence
Database Issue
Databases, Genetic
High-Throughput Nucleotide Sequencing
Internet
Metadata - statistics & numerical data
Phylogeny
Reproducibility of Results
SARS-CoV-2 - genetics
Sequence Analysis, RNA
Software
Viruses - classification
Viruses - genetics
ISSN:0305-1048, 1362-4962, 1362-4962
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Shrnutí:Abstract The Sequence Read Archive (SRA, https://www.ncbi.nlm.nih.gov/sra/) stores raw sequencing data and alignment information to enhance reproducibility and facilitate new discoveries through data analysis. Here we note changes in storage designed to increase access and highlight analyses that augment metadata with taxonomic insight to help users select data. In addition, we present three unanticipated applications of taxonomic analysis.
Bibliografie:ObjectType-Article-1
SourceType-Scholarly Journals-1
ObjectType-Feature-2
content type line 23
ISSN:0305-1048
1362-4962
1362-4962
DOI:10.1093/nar/gkab1053