The genomic landscapes of inflammation

Inflammation involves the activation of a highly coordinated gene expression program that is specific for the initial stimulus and occurs in a different manner in bystander parenchymal cells and professional immune system cells recruited to the inflamed site. Recent data demonstrate that development...

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Vydáno v:Genes & development Ročník 25; číslo 2; s. 101
Hlavní autoři: Natoli, Gioacchino, Ghisletti, Serena, Barozzi, Iros
Médium: Journal Article
Jazyk:angličtina
Vydáno: United States 15.01.2011
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ISSN:1549-5477, 1549-5477
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Abstract Inflammation involves the activation of a highly coordinated gene expression program that is specific for the initial stimulus and occurs in a different manner in bystander parenchymal cells and professional immune system cells recruited to the inflamed site. Recent data demonstrate that developmental transcription factors like the macrophage fate-determining Pu.1 set the stage for the activity of ubiquitous transcription factors activated by inflammatory stimuli, like NF-kB, AP-1, and interferon regulatory factors (IRFs). The intersection of lineage-determining and stimulus-activated transcription factors at enhancers explains cell type specificity in inflammatory responses.
AbstractList Inflammation involves the activation of a highly coordinated gene expression program that is specific for the initial stimulus and occurs in a different manner in bystander parenchymal cells and professional immune system cells recruited to the inflamed site. Recent data demonstrate that developmental transcription factors like the macrophage fate-determining Pu.1 set the stage for the activity of ubiquitous transcription factors activated by inflammatory stimuli, like NF-kB, AP-1, and interferon regulatory factors (IRFs). The intersection of lineage-determining and stimulus-activated transcription factors at enhancers explains cell type specificity in inflammatory responses.
Inflammation involves the activation of a highly coordinated gene expression program that is specific for the initial stimulus and occurs in a different manner in bystander parenchymal cells and professional immune system cells recruited to the inflamed site. Recent data demonstrate that developmental transcription factors like the macrophage fate-determining Pu.1 set the stage for the activity of ubiquitous transcription factors activated by inflammatory stimuli, like NF-kB, AP-1, and interferon regulatory factors (IRFs). The intersection of lineage-determining and stimulus-activated transcription factors at enhancers explains cell type specificity in inflammatory responses.Inflammation involves the activation of a highly coordinated gene expression program that is specific for the initial stimulus and occurs in a different manner in bystander parenchymal cells and professional immune system cells recruited to the inflamed site. Recent data demonstrate that developmental transcription factors like the macrophage fate-determining Pu.1 set the stage for the activity of ubiquitous transcription factors activated by inflammatory stimuli, like NF-kB, AP-1, and interferon regulatory factors (IRFs). The intersection of lineage-determining and stimulus-activated transcription factors at enhancers explains cell type specificity in inflammatory responses.
Author Barozzi, Iros
Ghisletti, Serena
Natoli, Gioacchino
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References 9110977 - Science. 1997 Apr 25;276(5312):589-92
16511593 - J Clin Invest. 2006 Mar;116(3):607-14
20303873 - Cell. 2010 Mar 19;140(6):821-32
20206554 - Immunity. 2010 Mar 26;32(3):317-28
17086198 - Nature. 2006 Nov 23;444(7118):499-502
20510734 - Adv Immunol. 2010;105:193-210
19729616 - Science. 2009 Oct 9;326(5950):257-63
10827957 - Science. 2000 May 26;288(5470):1439-41
11805289 - Proc Natl Acad Sci U S A. 2002 Feb 5;99(3):1503-8
16452502 - Genes Dev. 2006 Feb 1;20(3):282-96
12354379 - Immunity. 2002 Sep;17(3):251-63
12402037 - Nat Genet. 2002 Dec;32(4):606-13
9694804 - Genes Dev. 1998 Aug 1;12(15):2403-12
20303874 - Cell. 2010 Mar 19;140(6):833-44
20517297 - EMBO J. 2010 Jul 7;29(13):2147-60
19596240 - Cell. 2009 Jul 10;138(1):129-45
11009421 - Science. 2000 Sep 29;289(5488):2350-4
9171827 - Nat Genet. 1997 Jun;16(2):161-70
10973278 - Nat Immunol. 2000 Sep;1(3):214-20
18650913 - Nature. 2008 Jul 24;454(7203):428-35
20211142 - Cell. 2010 Mar 5;140(5):744-52
20485488 - PLoS Biol. 2010 May;8(5):e1000384
19596239 - Cell. 2009 Jul 10;138(1):114-28
20513432 - Mol Cell. 2010 May 28;38(4):576-89
18663365 - Nat Rev Genet. 2008 Sep;9(9):689-98
11283698 - Nat Rev Genet. 2001 Apr;2(4):256-67
11413190 - J Exp Med. 2001 Jun 18;193(12):1351-9
18319258 - J Biol Chem. 2008 May 2;283(18):12468-77
16455075 - Exp Cell Res. 2006 May 1;312(8):1312-22
19295514 - Nature. 2009 May 7;459(7243):108-12
20643336 - Immunity. 2010 Jul 23;33(1):12-24
20066094 - Cold Spring Harb Perspect Biol. 2009 Oct;1(4):a000224
20303872 - Cell. 2010 Mar 19;140(6):805-20
7590249 - Genes Dev. 1995 Nov 15;9(22):2736-46
19597511 - Nat Rev Rheumatol. 2009 Aug;5(8):448-56
21106671 - Genes Dev. 2010 Dec 15;24(24):2760-5
References_xml – reference: 16452502 - Genes Dev. 2006 Feb 1;20(3):282-96
– reference: 21106671 - Genes Dev. 2010 Dec 15;24(24):2760-5
– reference: 20517297 - EMBO J. 2010 Jul 7;29(13):2147-60
– reference: 11009421 - Science. 2000 Sep 29;289(5488):2350-4
– reference: 16511593 - J Clin Invest. 2006 Mar;116(3):607-14
– reference: 20485488 - PLoS Biol. 2010 May;8(5):e1000384
– reference: 19729616 - Science. 2009 Oct 9;326(5950):257-63
– reference: 20206554 - Immunity. 2010 Mar 26;32(3):317-28
– reference: 20066094 - Cold Spring Harb Perspect Biol. 2009 Oct;1(4):a000224
– reference: 20303872 - Cell. 2010 Mar 19;140(6):805-20
– reference: 9694804 - Genes Dev. 1998 Aug 1;12(15):2403-12
– reference: 20643336 - Immunity. 2010 Jul 23;33(1):12-24
– reference: 7590249 - Genes Dev. 1995 Nov 15;9(22):2736-46
– reference: 20303874 - Cell. 2010 Mar 19;140(6):833-44
– reference: 20513432 - Mol Cell. 2010 May 28;38(4):576-89
– reference: 20510734 - Adv Immunol. 2010;105:193-210
– reference: 19596239 - Cell. 2009 Jul 10;138(1):114-28
– reference: 11413190 - J Exp Med. 2001 Jun 18;193(12):1351-9
– reference: 17086198 - Nature. 2006 Nov 23;444(7118):499-502
– reference: 18319258 - J Biol Chem. 2008 May 2;283(18):12468-77
– reference: 20303873 - Cell. 2010 Mar 19;140(6):821-32
– reference: 10973278 - Nat Immunol. 2000 Sep;1(3):214-20
– reference: 9110977 - Science. 1997 Apr 25;276(5312):589-92
– reference: 20211142 - Cell. 2010 Mar 5;140(5):744-52
– reference: 11283698 - Nat Rev Genet. 2001 Apr;2(4):256-67
– reference: 16455075 - Exp Cell Res. 2006 May 1;312(8):1312-22
– reference: 18650913 - Nature. 2008 Jul 24;454(7203):428-35
– reference: 9171827 - Nat Genet. 1997 Jun;16(2):161-70
– reference: 18663365 - Nat Rev Genet. 2008 Sep;9(9):689-98
– reference: 12354379 - Immunity. 2002 Sep;17(3):251-63
– reference: 19597511 - Nat Rev Rheumatol. 2009 Aug;5(8):448-56
– reference: 10827957 - Science. 2000 May 26;288(5470):1439-41
– reference: 12402037 - Nat Genet. 2002 Dec;32(4):606-13
– reference: 19596240 - Cell. 2009 Jul 10;138(1):129-45
– reference: 11805289 - Proc Natl Acad Sci U S A. 2002 Feb 5;99(3):1503-8
– reference: 19295514 - Nature. 2009 May 7;459(7243):108-12
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SubjectTerms Animals
Gene Expression Regulation
Genome
Humans
Inflammation - genetics
Macrophages - metabolism
Transcription Factors - metabolism
Title The genomic landscapes of inflammation
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