Evaluation of automated and semi-automated skull-stripping algorithms using similarity index and segmentation error
The skull-stripping in the MR brain image appears to be a key issue in neuroimage analysis. In this paper, we evaluated the accuracy and efficiency of both automated and semi-automated skull-stripping methods. The evaluation was performed on both simulated and real data with the ground truth in skul...
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| Vydané v: | Computers in biology and medicine Ročník 33; číslo 6; s. 495 - 507 |
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| Hlavní autori: | , , , , , |
| Médium: | Journal Article |
| Jazyk: | English |
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Oxford
Elsevier Ltd
01.11.2003
New York, NY Elsevier Science Elsevier Limited |
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| ISSN: | 0010-4825, 1879-0534 |
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| Abstract | The skull-stripping in the MR brain image appears to be a key issue in neuroimage analysis. In this paper, we evaluated the accuracy and efficiency of both automated and semi-automated skull-stripping methods. The evaluation was performed on both simulated and real data with the ground truth in skull-stripping. Although automated method showed better efficient results, it should require additional intervention. In contrast to that, semi-automated method showed better accurate results, but it was time consuming and prone to operator bias. Therefore, it might be practical that the semi-automated method was used as the post-processing of the automated one. |
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| AbstractList | The skull-stripping in the MR brain image appears to be a key issue in neuroimage analysis. In this paper, we evaluated the accuracy and efficiency of both automated and semi-automated skull-stripping methods. The evaluation was performed on both simulated and real data with the ground truth in skull-stripping. Although automated method showed better efficient results, it should require additional intervention. In contrast to that, semi-automated method showed better accurate results, but it was time consuming and prone to operator bias. Therefore, it might be practical that the semi-automated method was used as the post-processing of the automated one. The skull-stripping in the MR brain image appears to be a key issue in neuroimage analysis. In this paper, we evaluated the accuracy and efficiency of both automated and semi-automated skull-stripping methods. The evaluation was performed on both simulated and real data with the ground truth in skull-stripping. Although automated method showed better efficient results, it should require additional intervention. In contrast to that, semi-automated method showed better accurate results, but it was time consuming and prone to operator bias. Therefore, it might be practical that the semi-automated method was used as the post-processing of the automated one.The skull-stripping in the MR brain image appears to be a key issue in neuroimage analysis. In this paper, we evaluated the accuracy and efficiency of both automated and semi-automated skull-stripping methods. The evaluation was performed on both simulated and real data with the ground truth in skull-stripping. Although automated method showed better efficient results, it should require additional intervention. In contrast to that, semi-automated method showed better accurate results, but it was time consuming and prone to operator bias. Therefore, it might be practical that the semi-automated method was used as the post-processing of the automated one. |
| Author | Nam, Sang Hee Yoon, Uicheul Kim, Jung-Hyun Lee, Jong-Min Kim, In-Young Kim, Sun I. |
| Author_xml | – sequence: 1 givenname: Jong-Min surname: Lee fullname: Lee, Jong-Min organization: Department of Biomedical Engineering, College of Medicine, Hanyang University, Haengdang-dong, Seongdong-ku, Seoul 133-791, South Korea – sequence: 2 givenname: Uicheul surname: Yoon fullname: Yoon, Uicheul organization: Department of Biomedical Engineering, College of Medicine, Hanyang University, Haengdang-dong, Seongdong-ku, Seoul 133-791, South Korea – sequence: 3 givenname: Sang Hee surname: Nam fullname: Nam, Sang Hee organization: Medical Imaging Research Center, Inje University, South Korea – sequence: 4 givenname: Jung-Hyun surname: Kim fullname: Kim, Jung-Hyun organization: Department of Biomedical Engineering, College of Medicine, Hanyang University, Haengdang-dong, Seongdong-ku, Seoul 133-791, South Korea – sequence: 5 givenname: In-Young surname: Kim fullname: Kim, In-Young organization: Department of Biomedical Engineering, College of Medicine, Hanyang University, Haengdang-dong, Seongdong-ku, Seoul 133-791, South Korea – sequence: 6 givenname: Sun I. surname: Kim fullname: Kim, Sun I. email: sunkim@hanyang.ac.kr organization: Department of Biomedical Engineering, College of Medicine, Hanyang University, Haengdang-dong, Seongdong-ku, Seoul 133-791, South Korea |
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| Cites_doi | 10.1097/00004728-199303000-00007 10.1109/42.552054 10.1016/S0010-4825(02)00023-9 10.1002/(SICI)1522-2594(199907)42:1<127::AID-MRM17>3.0.CO;2-O 10.1093/cercor/8.4.372 10.1117/12.467158 10.1093/brain/121.9.1661 10.1097/00004728-199707000-00008 10.1002/hbm.10062 10.1192/bjp.179.4.330 10.1006/nimg.2000.0730 10.1109/42.20356 10.1111/j.1528-1157.1998.tb01158.x 10.1109/42.816072 10.1109/42.363096 10.1007/BF03190353 |
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| Keywords | False positive rate Inter-rater reliability Similarity index Skull-stripping False negative rate Simulated T1-weighted MRI |
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| Snippet | The skull-stripping in the MR brain image appears to be a key issue in neuroimage analysis. In this paper, we evaluated the accuracy and efficiency of both... |
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| SubjectTerms | Algorithms Biological and medical sciences Brain - anatomy & histology False negative rate False positive rate Humans Image Processing, Computer-Assisted Inter-rater reliability Magnetic Resonance Imaging - methods Medical sciences Reproducibility of Results Similarity index Simulated T1-weighted MRI Skull-stripping |
| Title | Evaluation of automated and semi-automated skull-stripping algorithms using similarity index and segmentation error |
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