Halcyon: an accurate basecaller exploiting an encoder–decoder model with monotonic attention

Abstract Motivation In recent years, nanopore sequencing technology has enabled inexpensive long-read sequencing, which promises reads longer than a few thousand bases. Such long-read sequences contribute to the precise detection of structural variations and accurate haplotype phasing. However, deci...

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Veröffentlicht in:	Bioinformatics Jg. 37; H. 9; S. 1211 - 1217
Hauptverfasser:	Konishi, Hiroki, Yamaguchi, Rui, Yamaguchi, Kiyoshi, Furukawa, Yoichi, Imoto, Seiya
Format:	Journal Article
Sprache:	Englisch
Veröffentlicht:	England Oxford University Press 09.06.2021
Schlagworte:	DNA High-Throughput Nucleotide Sequencing Humans Nanopore Sequencing Nanopores Original Papers Sequence Analysis, DNA Software
ISSN:	1367-4803, 1367-4811, 1460-2059, 1367-4811
Online-Zugang:	Volltext
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