Evaluating significance in linear mixed-effects models in R
Mixed-effects models are being used ever more frequently in the analysis of experimental data. However, in the lme4 package in R the standards for evaluating significance of fixed effects in these models (i.e., obtaining p -values) are somewhat vague. There are good reasons for this, but as research...
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| Vydáno v: | Behavior research methods Ročník 49; číslo 4; s. 1494 - 1502 |
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| Hlavní autor: | |
| Médium: | Journal Article |
| Jazyk: | angličtina |
| Vydáno: |
New York
Springer US
01.08.2017
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| Témata: | |
| ISSN: | 1554-3528, 1554-3528 |
| On-line přístup: | Získat plný text |
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| Shrnutí: | Mixed-effects models are being used ever more frequently in the analysis of experimental data. However, in the lme4 package in R the standards for evaluating significance of fixed effects in these models (i.e., obtaining
p
-values) are somewhat vague. There are good reasons for this, but as researchers who are using these models are required in many cases to report
p
-values, some method for evaluating the significance of the model output is needed. This paper reports the results of simulations showing that the two most common methods for evaluating significance, using likelihood ratio tests and applying the
z
distribution to the Wald
t
values from the model output (
t
-as-
z
), are somewhat anti-conservative, especially for smaller sample sizes. Other methods for evaluating significance, including parametric bootstrapping and the Kenward-Roger and Satterthwaite approximations for degrees of freedom, were also evaluated. The results of these simulations suggest that Type 1 error rates are closest to .05 when models are fitted using REML and
p
-values are derived using the Kenward-Roger or Satterthwaite approximations, as these approximations both produced acceptable Type 1 error rates even for smaller samples. |
|---|---|
| Bibliografie: | ObjectType-Article-1 SourceType-Scholarly Journals-1 ObjectType-Feature-2 content type line 23 |
| ISSN: | 1554-3528 1554-3528 |
| DOI: | 10.3758/s13428-016-0809-y |