chewBBACA: A complete suite for gene-by-gene schema creation and strain identification

Gene-by-gene approaches are becoming increasingly popular in bacterial genomic epidemiology and outbreak detection. However, there is a lack of open-source scalable software for schema definition and allele calling for these methodologies. The chewBBACA suite was designed to assist users in the crea...

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Bibliographic Details

Published in:	Microbial genomics Vol. 4; no. 3
Main Authors:	Silva, Mickael, Machado, Miguel P., Silva, Diogo N., Rossi, Mirko, Moran-Gilad, Jacob, Santos, Sergio, Ramirez, Mario, Carriço, João André
Format:	Journal Article
Language:	English
Published:	England Microbiology Society 01.03.2018
Subjects:	Methods Paper allele calling chewBBACA schema multilocus sequence typing gene-by-gene
ISSN:	2057-5858, 2057-5858
Online Access:	Get full text
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