Comparison of real-time reverse transcriptase–polymerase chain reaction and nested or commercial reverse transcriptase–polymerase chain reaction for the detection of hepatitis E virus particle in human serum

Hepatitis E virus (HEV) was originally identified as the causative agent of enterically transmitted non-A, non-B hepatitis. The virus is the 7.5-kb single-stranded positive RNA virus and has been classified in the genus Herpesvirus of the family Herpesviridae. Recently, HEVs were identified from sev...

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Vydané v:	Diagnostic microbiology and infectious disease Ročník 56; číslo 3; s. 269 - 274
Hlavní autori:	Ahn, Jeong-min, Rayamajhi, Nabin, Gyun Kang, Sang, Sang Yoo, Han
Médium:	Journal Article
Jazyk:	English
Vydavateľské údaje:	New York, NY Elsevier Inc 01.11.2006 Elsevier
Predmet:	Biological and medical sciences Fundamental and applied biological sciences. Psychology Hepatitis Antibodies - blood Hepatitis E - diagnosis Hepatitis E virus Hepatitis E virus - classification Hepatitis E virus - genetics Hepatitis E virus - immunology Hepatitis E virus - isolation & purification Herpesvirus HEV Humans Infectious diseases Medical sciences Microbiology Miscellaneous Real-time RT-PCR Reverse Transcriptase Polymerase Chain Reaction - methods RNA, Viral - blood Sensitivity and Specificity Virology Real-time RT-PCR HEV Human RNA-directed DNA polymerase Microbiology Enzyme Transferases Real time Hepatitis E virus Virus Infection Polymerase chain reaction Calicivirus Nucleotidyltransferases Caliciviridae Serum Detection Reverse transcription polymerase chain reaction
ISSN:	0732-8893, 1879-0070
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Popis
Shrnutí:	Hepatitis E virus (HEV) was originally identified as the causative agent of enterically transmitted non-A, non-B hepatitis. The virus is the 7.5-kb single-stranded positive RNA virus and has been classified in the genus Herpesvirus of the family Herpesviridae. Recently, HEVs were identified from several countries worldwide from human and animals including swine. Studies on the genomic analysis of HEV isolates and seroprevalence of anti-HEV antibodies suggested that HEV has been considered as a potent zoonotic agent. The HEV infection has been diagnosed by detection of anti-HEV antibodies or virus by using reverse transcriptase–polymerase chain reaction (RT-PCR) methods in the blood or feces. However, these diagnostic methods were not quantitative and not enough to diagnose small amounts of target molecules. Moreover, these methods were not adequate during the incubation period or early acute phase. To overcome these problems, real-time RT-PCR method was developed with a cloned viral DNA and in vitro transcribed cRNA in this study. The sensitivity of the reaction was 1.68 × 10 1 copies per reaction. Correlation coefficient values of the reactions in the repeated experiments were over 0.99. Ranges of slopes and coefficient variation values were from 3.341 to 3.435 and from 1.20 to 5.98, respectively. In comparison of the real-time PCR with nested or commercial RT-PCR, HEV particles could be detected in the negative samples, which were determined by conventional nested RT-PCR.
Bibliografia:	ObjectType-Article-1 SourceType-Scholarly Journals-1 ObjectType-Feature-2 content type line 23 ObjectType-Article-2 ObjectType-Feature-1
ISSN:	0732-8893 1879-0070
DOI:	10.1016/j.diagmicrobio.2006.04.010