Earth Biogenome Project: present status and future plans

Earth Biogenome Project (EBP) is an ambitious project targeted to provide high-quality reference genome sequences for all 1.8 million named extant (living) eukaryote species. The project was launched on 1 November 2018 with an initial 2 years’ pilot phase (2018–2020) followed by Phase I (2020–2023),...

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Vydáno v:Trends in genetics Ročník 38; číslo 8; s. 811 - 820
Hlavní autor: Gupta, Pushpendra Kumar
Médium: Journal Article
Jazyk:angličtina
Vydáno: England Elsevier Ltd 01.08.2022
Témata:
biodiversity
DNA sequencing
genome
network of networks
genome
network of networks
biodiversity
DNA sequencing
ISSN:0168-9525
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Shrnutí:Earth Biogenome Project (EBP) is an ambitious project targeted to provide high-quality reference genome sequences for all 1.8 million named extant (living) eukaryote species. The project was launched on 1 November 2018 with an initial 2 years’ pilot phase (2018–2020) followed by Phase I (2020–2023), during which genomes of 9400 species will be sequenced. The genomes of the remaining ~1.7 million species will be sequenced in a planned manner during Phase II (2024–2027) and Phase III (2028–2030). In view of the excitement generated and the progress already made, the subject was covered in a Special Feature of a recent issue of PNAS (25 January 2022). The present status and future plans of EBP along with challenges faced are briefly discussed in this article. Earth Biogenome Project (EBP) has a target of developing reference genomes of 1.8 million named species by the year 2030 in three phases. It is a network of ~50 networks.The project will make use of emerging next generation sequencing technologies, including both short and long reads.Different aspects of EBP have been covered in nine articles included in a Special Feature of Proceedings of the National Academy of Sciences (PNAS) (25 November 2022).The Office of EBP is located in the Genome Center of the University of California, Davis (UCD); HA Lewin is the Chair with John Kress and Gene Robinson as Co-Chairs. There are eight technical subcommittees to monitor progress of EBP.The output of EBP will facilitate development of methods for conservation, phylogeny and for maintenance of ecological systems.
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ISSN:0168-9525
DOI:10.1016/j.tig.2022.04.008