IRootLab: a free and open-source MATLAB toolbox for vibrational biospectroscopy data analysis

IRootLab is a free and open-source MATLAB toolbox for vibrational biospectroscopy (VBS) data analysis. It offers an object-oriented programming class library, graphical user interfaces (GUIs) and automatic MATLAB code generation. The class library contains a large number of methods, concepts and vis...

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Bibliographic Details
Published in:Bioinformatics Vol. 29; no. 8; pp. 1095 - 1097
Main Authors: Trevisan, Júlio, Angelov, Plamen P., Scott, Andrew D., Carmichael, Paul L., Martin, Francis L.
Format: Journal Article
Language:English
Published: England 15.04.2013
Subjects:
Software
Spectrophotometry, Infrared - methods
Spectrum Analysis, Raman - methods
User-Computer Interface
ISSN:1367-4803, 1367-4811, 1367-4811, 1460-2059
Online Access:Get full text
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Description
Summary:IRootLab is a free and open-source MATLAB toolbox for vibrational biospectroscopy (VBS) data analysis. It offers an object-oriented programming class library, graphical user interfaces (GUIs) and automatic MATLAB code generation. The class library contains a large number of methods, concepts and visualizations for VBS data analysis, some of which are introduced in the toolbox. The GUIs provide an interface to the class library, including a module to merge several spectral files into a dataset. Automatic code allows developers to quickly write VBS data analysis scripts and is a unique resource among tools for VBS. Documentation includes a manual, tutorials, Doxygen-generated reference and a demonstration showcase. IRootLab can handle some of the most popular file formats used in VBS. License: GNU-LGPL. Availability: Official website: http://irootlab.googlecode.com/. Contact:  juliotrevisan@gmail.com Supplementary information:  Supplementary data are available at Bioinformatics online.
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ISSN:1367-4803
1367-4811
1367-4811
1460-2059
DOI:10.1093/bioinformatics/btt084