SPACE: STRING proteins as complementary embeddings

Representation learning has revolutionized sequence-based prediction of protein function and subcellular localization. Protein networks are an important source of information complementary to sequences, but they have proven challenges being used in machine learning, especially in a cross-species set...

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Bibliographic Details
Published in:	bioRxiv
Main Authors:	Hu, Dewei, Szklarczyk, Damian, Christian Von Mering, Lars Juhl Jensen
Format:	Paper
Language:	English
Published:	Cold Spring Harbor Cold Spring Harbor Laboratory Press 26.11.2024 Cold Spring Harbor Laboratory
Edition:	1.1
Subjects:	Amino acid sequence Bioinformatics Embedding Localization Orthology Predictions Protein sources Proteins Species Protein embedding Function prediction Networks
ISSN:	2692-8205, 2692-8205
Online Access:	Get full text
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