Cognitive Correlative Encoding for Genome Sequence Matching in Hyperdimensional System

Pattern matching is one of the key algorithms in identifying and analyzing genomic data. In this paper, we propose HYPERS, a novel framework supporting highly efficient and parallel pattern matching based on HyperDimensional computing (HDC). HYPERS transforms inherent sequential processes of pattern...

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Bibliographic Details

Published in:	2021 58th ACM/IEEE Design Automation Conference (DAC) pp. 781 - 786
Main Authors:	Poduval, Prathyush, Zou, Zhuowen, Yin, Xunzhao, Sadredini, Elaheh, Imani, Mohsen
Format:	Conference Proceeding
Language:	English
Published:	IEEE 05.12.2021
Subjects:	Genomics Graphics processing units Hardware Libraries Software Transforms
Online Access:	Get full text
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