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CARD-FISH counts of the water column and sediment at HAUSGARTEN, Fram Strait

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Bibliographic Details
Title: CARD-FISH counts of the water column and sediment at HAUSGARTEN, Fram Strait
Authors: Salman-Carvalho, Verena
Publisher Information: PANGAEA
Publication Year: 2019
Collection: PANGAEA - Data Publisher for Earth & Environmental Science (AWI Bremerhaven / MARUM Bremen)
Subject Terms: ABYSS, ARK-XXVIII/2, Assessment of bacterial life and matter cycling in deep-sea surface sediments, Bacteria, targed with EUB338(I-III) oligonucleotide FISH-probe, CARD-FISH, Catalysed reporter deposition-fluorescence in situ hybridization (CARD-FISH), cell counts, Chloroflexi, targeted with CFX1223 and GNSB941 oligonucleotides FISH-probe, CTD/Rosette, CTD-RO, Date/Time of event, Depth, bottom/max, sediment/rock, top/min, water, EGI, Elevation of event, Event label, Fluorescence determination of DAPI stain, Hausgarten, HGIV, Latitude of event, Longitude of event, Method/Device of event, Microbial abundance, cells, Multicorer with television
Subject Geographic: MEDIAN LATITUDE: 79.340760 * MEDIAN LONGITUDE: 2.919263 * SOUTH-BOUND LATITUDE: 78.973330 * WEST-BOUND LONGITUDE: -5.290500 * NORTH-BOUND LATITUDE: 79.760330 * EAST-BOUND LONGITUDE: 4.386000 * DATE/TIME START: 2014-06-17T14:30:00 * DATE/TIME END: 2014-06-25T16:59:00 * MINIMUM ELEVATION: -2566.3 m * MAXIMUM ELEVATION: -1056.3 m
Description: We determined the concentrations of different types of bacteria via Catalysed reporter deposition-fluorescence in situ hybridization (CARD-FISH) at different depths of the water column as well as several centimeters of the surficial deep-sea sediment. Sampling sites were stations HGIV, EGI, and N4 of the long-term ecological research observatory HAUSGARTEN in the Fram Strait.
Document Type: dataset
File Description: text/tab-separated-values, 77 data points
Language: English
Relation: Cardozo-Mino, Magda Guadalupe; Salman-Carvalho, Verena; Boetius, Antje; Fadeev, Eduard (2019): CARD-FISH cell counts of taxonomic bacterial and archaeal groups in Fram Strait during PS99.2 [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.905212; Engel, Anja; Piontek, Judith (2018): Bacterial data from CTD stations during POLARSTERN cruise PS85 (ARK-XXVIII/2) [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.887881; Graeve, Martin; Ludwichowski, Kai-Uwe (2017): Inorganic nutrients measured on water bottle samples during POLARSTERN cruise PS85 (ARK-XXVIII/2) [dataset]. Alfred Wegener Institute for Polar and Marine Research, Bremerhaven (1986-2013), PANGAEA, https://doi.org/10.1594/PANGAEA.882217; Nöthig, Eva-Maria; Winkler, Maria; Bonk, Elizabeth (2018): Chlorophyll a measured on water bottle samples during POLARSTERN cruise PS85 (ARK-XXVIII/2) [dataset]. Alfred Wegener Institute, Helmholtz Centre for Polar and Marine Research, Bremerhaven, PANGAEA, https://doi.org/10.1594/PANGAEA.887840; Pala, Claudia; Bienhold, Christina; Boetius, Antje; Salman-Carvalho, Verena: CARD-FISH cell counts of Bacteria and Archaea in sediments of HAUSGARTEN, Fram Strait, from Polarstern cruise PS85 [dataset]. PANGAEA, https://doi.pangaea.de/10.1594/PANGAEA.905210; Rabe, Benjamin; von Appen, Wilken-Jon; Latarius, Katrin; Wisotzki, Andreas (2014): Physical oceanography measured on water bottle samples during POLARSTERN cruise PS85 (ARK-XXVIII/2) [dataset]. Alfred Wegener Institute, Helmholtz Centre for Polar and Marine Research, Bremerhaven, PANGAEA, https://doi.org/10.1594/PANGAEA.837427; Oligonucleotide probes and formamide concentration of the water column and sediment at HAUSGARTEN (URI: https://store.pangaea.de/Publications/Salman-Carvalho-2019/Oligonucleotide-probes_Salman-Carvalho_2019.pdf); https://doi.pangaea.de/10.1594/PANGAEA.903569; https://doi.org/10.1594/PANGAEA.903569
DOI: 10.1594/PANGAEA.903569
Availability: https://doi.pangaea.de/10.1594/PANGAEA.903569
https://doi.org/10.1594/PANGAEA.903569
Rights: CC-BY-4.0: Creative Commons Attribution 4.0 International ; Access constraints: unrestricted ; info:eu-repo/semantics/openAccess
Accession Number: edsbas.B3AB3215
Database: BASE
Description
Abstract:We determined the concentrations of different types of bacteria via Catalysed reporter deposition-fluorescence in situ hybridization (CARD-FISH) at different depths of the water column as well as several centimeters of the surficial deep-sea sediment. Sampling sites were stations HGIV, EGI, and N4 of the long-term ecological research observatory HAUSGARTEN in the Fram Strait.
DOI:10.1594/PANGAEA.903569