Dynamic supernodes in sparse Cholesky update/downdate and triangular solves

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Title: Dynamic supernodes in sparse Cholesky update/downdate and triangular solves
Authors: Timothy A. Davis, William W. Hager
Contributors: The Pennsylvania State University CiteSeerX Archives
Source: http://www.cise.ufl.edu/~davis/techreports/cholmod/tr06-004.pdf.
Publication Year: 2006
Collection: CiteSeerX
Description: The supernodal method for sparse Cholesky factorization represents the factor L as a set of supernodes, each consisting of a contiguous set of columns of L with identical nonzero pattern. A conventional supernode is stored as a dense submatrix. While this is suitable for sparse Cholesky factorization where the nonzero pattern of L does not change, it is not suitable for methods that modify a sparse Cholesky factorization after a low-rank change to A (an update/downdate, A = A±WW T). Supernodes merge and split apart during an update/downdate. Dynamic supernodes are introduced, which allow a sparse Cholesky update/downdate to obtain performance competitive with conventional supernodal methods. A dynamic supernodal solver is shown to exceed the performance of the conventional (BLAS-based) supernodal method for solving triangular systems. These methods are incorporated into CHOLMOD, a sparse Cholesky factorization and update/downdate package, which forms the basis of x=A\b in MAT-LAB when A is sparse and symmetric positive definite. 1
Document Type: text
File Description: application/pdf
Language: English
Relation: http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.135.2462
Availability: http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.135.2462
http://www.cise.ufl.edu/~davis/techreports/cholmod/tr06-004.pdf
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Accession Number: edsbas.179FC5AB
Database: BASE
Description
Abstract:The supernodal method for sparse Cholesky factorization represents the factor L as a set of supernodes, each consisting of a contiguous set of columns of L with identical nonzero pattern. A conventional supernode is stored as a dense submatrix. While this is suitable for sparse Cholesky factorization where the nonzero pattern of L does not change, it is not suitable for methods that modify a sparse Cholesky factorization after a low-rank change to A (an update/downdate, A = A±WW T). Supernodes merge and split apart during an update/downdate. Dynamic supernodes are introduced, which allow a sparse Cholesky update/downdate to obtain performance competitive with conventional supernodal methods. A dynamic supernodal solver is shown to exceed the performance of the conventional (BLAS-based) supernodal method for solving triangular systems. These methods are incorporated into CHOLMOD, a sparse Cholesky factorization and update/downdate package, which forms the basis of x=A\b in MAT-LAB when A is sparse and symmetric positive definite. 1