Neurodesk: an accessible, flexible and portable data analysis environment for reproducible neuroimaging
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| Titel: | Neurodesk: an accessible, flexible and portable data analysis environment for reproducible neuroimaging |
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| Autoren: | Renton, Angela I, Dao, Thuy T, Johnstone, Tom, Civier, Oren, Sullivan, Ryan P, White, David J, Lyons, Paris, Slade, Benjamin M, Abbott, David F, Amos, Toluwani J, Bollmann, Saskia, Botting, Andy, Campbell, Megan E J, Chang, Jeryn, Close, Thomas G, Dörig, Monika, Eckstein, Korbinian, Egan, Gary F, Evas, Stefanie, Flandin, Guillaume, Garner, Kelly G, Garrido, Marta I, Ghosh, Satrajit S, Grignard, Martin, Halchenko, Yaroslav O, Hannan, Anthony J, Heinsfeld, Anibal S, Huber, Laurentius, Hughes, Matthew E, Kaczmarzyk, Jakub R, Kasper, Lars, Kuhlmann, Levin, Lou, Kexin, Mantilla-Ramos, Yorguin-Jose, Mattingley, Jason B, Meier, Michael L, Morris, Jo, Narayanan, Akshaiy, Pestilli, Franco, Puce, Aina, Ribeiro, Fernanda L, Rogasch, Nigel C, Rorden, Chris, Schira, Mark M, Shaw, Thomas B, Sowman, Paul F, Spitz, Gershon, Stewart, Ashley W, Ye, Xincheng, Zhu, Judy D, Narayanan, Aswin, Bollmann, Steffen |
| Weitere Verfasser: | Swinburne University of Technology |
| Quelle: | Nature Methods. 21:804-808 |
| Verlagsinformationen: | Springer Science and Business Media LLC, 2024. |
| Publikationsjahr: | 2024 |
| Schlagwörter: | Reproducibility of Results, Brain, Neuroimaging, Cell Biology, Brain/diagnostic imaging, Biochemistry, Engineering, computing & technology, Ingénierie, informatique & technologie, User-Computer Interface, Humans, Neuroimaging/methods, Molecular Biology, Software, Biotechnology |
| Beschreibung: | Neuroimaging research requires purpose-built analysis software, which is challenging to install and may produce different results across computing environments. The community-oriented, open-source Neurodesk platform ( https://www.neurodesk.org/ ) harnesses a comprehensive and growing suite of neuroimaging software containers. Neurodesk includes a browser-accessible virtual desktop, command-line interface and computational notebook compatibility, allowing for accessible, flexible, portable and fully reproducible neuroimaging analysis on personal workstations, high-performance computers and the cloud. |
| Publikationsart: | Article |
| Sprache: | English |
| ISSN: | 1548-7105 1548-7091 |
| DOI: | 10.1038/s41592-023-02145-x |
| Zugangs-URL: | https://pubmed.ncbi.nlm.nih.gov/38191935 |
| Rights: | Springer Nature TDM |
| Dokumentencode: | edsair.doi.dedup.....89c108df5adead558b9e4013a812f98d |
| Datenbank: | OpenAIRE |
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Nájsť tento článok vo Web of Science | Abstract: | Neuroimaging research requires purpose-built analysis software, which is challenging to install and may produce different results across computing environments. The community-oriented, open-source Neurodesk platform ( https://www.neurodesk.org/ ) harnesses a comprehensive and growing suite of neuroimaging software containers. Neurodesk includes a browser-accessible virtual desktop, command-line interface and computational notebook compatibility, allowing for accessible, flexible, portable and fully reproducible neuroimaging analysis on personal workstations, high-performance computers and the cloud. |
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| ISSN: | 15487105 15487091 |
| DOI: | 10.1038/s41592-023-02145-x |