SPV: a JavaScript Signaling Pathway Visualizer.

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Bibliographic Details
Title: SPV: a JavaScript Signaling Pathway Visualizer.
Authors: Calderone, Alberto, Cesareni, Gianni
Source: Bioinformatics; Aug2018, Vol. 34 Issue 15, p2684-2686, 3p
Subject Terms: MOLECULAR interactions, CELL communication, JAVASCRIPT programming language, DATA visualization, OPEN source software, PROTEIN-protein interactions
Abstract: Summary The visualization of molecular interactions annotated in web resources is useful to offer to users such information in a clear intuitive layout. These interactions are frequently represented as binary interactions that are laid out in free space where, different entities, cellular compartments and interaction types are hardly distinguishable. Signaling Pathway Visualizer is a free open source JavaScript library, which offers a series of pre-defined elements, compartments and interaction types meant to facilitate the representation of signaling pathways consisting of causal interactions without neglecting simple protein–protein interaction networks. Availability and implementation Freely available under Apache version 2 license; Source code: https://github.com/Sinnefa/SPV_Signaling_Pathway_Visualizer_v1.0. Language: JavaScript; Web technology: Scalable Vector Graphics; Libraries: D3.js. [ABSTRACT FROM AUTHOR]
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Database: Complementary Index
Description
Abstract:Summary The visualization of molecular interactions annotated in web resources is useful to offer to users such information in a clear intuitive layout. These interactions are frequently represented as binary interactions that are laid out in free space where, different entities, cellular compartments and interaction types are hardly distinguishable. Signaling Pathway Visualizer is a free open source JavaScript library, which offers a series of pre-defined elements, compartments and interaction types meant to facilitate the representation of signaling pathways consisting of causal interactions without neglecting simple protein–protein interaction networks. Availability and implementation Freely available under Apache version 2 license; Source code: https://github.com/Sinnefa/SPV_Signaling_Pathway_Visualizer_v1.0. Language: JavaScript; Web technology: Scalable Vector Graphics; Libraries: D3.js. [ABSTRACT FROM AUTHOR]
ISSN:13674803
DOI:10.1093/bioinformatics/bty188