Validation of genotype imputation in Southeast Asian populations and the effect of single nucleotide polymorphism annotation on imputation outcome

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Bibliographische Detailangaben
Veröffentlicht in:BMC Medical Genetics Jg. 19
Hauptverfasser: Harald Grove, Prida Malasit, Prapat Suriyaphol, Nattaya Tangthawornchaikul, Anavaj Sakuntabhai, Worachart Lert-itthiporn, Fumihiko Matsuda, Bhoom Suktitipat
Format: Journal Article
Sprache:Japanisch
Veröffentlicht: Springer Science and Business Media LLC 13.02.2018
Schlagworte:
1000 Genomes Project
[INFO.INFO-BI]Computer Science [cs]/Bioinformatics [q-bio.QM]
[SDV.BIBS] Life Sciences [q-bio]/Quantitative Methods [q-bio.QM]
[SDV.GEN.GH] Life Sciences [q-bio]/Genetics/Human genetics
[SDV.GEN.GPO]Life Sciences [q-bio]/Genetics/Populations and Evolution [q-bio.PE]
[SDV.MP.PAR] Life Sciences [q-bio]/Microbiology and Parasitology/Parasitology
[SDV.MP.VIR] Life Sciences [q-bio]/Microbiology and Parasitology/Virology
[SDV.SPEE] Life Sciences [q-bio]/Santé publique et épidémiologie
Adolescent
Asian People
Biochemistry, Genetics and Molecular Biology
Biology
Child
Child, Preschool
FOS: Biological sciences
FOS: Mathematics
Gene
Gene Frequency
Genetic association
Genetic Association Studies
Genetics
Genetics, Population
Genome, Human
Genome-wide association study
Genomic Selection in Plant and Animal Breeding
Genomic Studies and Association Analyses
Genotype
Haplotype
Haplotype Mapping
Haplotypes
Humans
Imputation
Imputation (statistics)
Infant
Internal medicine
International HapMap Project
Life Sciences
Linkage Disequilibrium
Mathematics
MESH: Adolescent
MESH: Asian Continental Ancestry Group
MESH: Child
MESH: Child, Preschool
MESH: Gene Frequency
MESH: Genetic Association Studies
MESH: Genetics, Population
MESH: Genome, Human
MESH: Genotype
MESH: Haplotypes
MESH: Humans
MESH: Infant
MESH: Linkage Disequilibrium
MESH: Molecular Sequence Annotation
MESH: Polymorphism, Single Nucleotide
MESH: Reproducibility of Results
Microarray Data Analysis and Gene Expression Profiling
Minor allele frequency
Missing data
Molecular Biology
Molecular Sequence Annotation
Pan-Asian SNP
Polymorphism, Single Nucleotide
QH426-470
RC31-1245
Reproducibility of Results
Research Article
Single-nucleotide polymorphism
SNP
SNP annotation
Statistics
ISSN:1471-2350
Online-Zugang:Volltext
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Beschreibung
ISSN:1471-2350
DOI:10.1186/s12881-018-0534-8