Parallel DNA Sequencing using Exact String-Matching Algorithms for Multiple Patterns

String matching algorithms are used to find specific patterns within a larger file or sequence. They are extensively used in bioinformatics, molecular biology, and information retrieval. With the world of data at our fingertips, the aim is to accelerate its processing. This study focuses on applying...

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Bibliographic Details
Published in:	International Conference in Information, Communication and Automation Technologies (Online) pp. 1 - 6
Main Authors:	Terzic, Dzenana, Pita, Naida, Becirspahic, Nejla, Muhic, Dzenis
Format:	Conference Proceeding
Language:	English
Published:	IEEE 02.09.2025
Subjects:	Bioinformatics Brute Force Burrows-Wheeler transform CUDA DNA exact FM Index Force Frequency modulation Indexes parallel Pattern matching Sequential analysis Sorting String-matching Suffix Array Testing Time complexity Transforms
ISSN:	2643-1858
Online Access:	Get full text
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