Assessing the Diversity and Specificity of Two Freshwater Viral Communities through Metagenomics

Transitions between saline and fresh waters have been shown to be infrequent for microorganisms. Based on host-specific interactions, the presence of specific clades among hosts suggests the existence of freshwater-specific viral clades. Yet, little is known about the composition and diversity of th...

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Bibliographic Details
Published in:	PloS one Vol. 7; no. 3; p. e33641
Main Authors:	Roux, Simon, Enault, Francois, Robin, Agnès, Ravet, Viviane, Personnic, Sébastien, Theil, Sébastien, Colombet, Jonathan, Sime-Ngando, Télesphore, Debroas, Didier
Format:	Journal Article
Language:	English
Published:	United States Public Library of Science 14.03.2012 Public Library of Science (PLoS)
Subjects:	Analysis Aquatic ecosystems Base Sequence Biodiversity and Ecology Bioinformatics Biology Biomes Caudovirales Circoviridae Cluster Analysis Clusters Communities Deoxyribonucleic acid DNA DNA viruses Ecological monitoring Environmental Sciences France Fresh water Fresh Water - virology Freshwater Freshwater ecosystems Freshwater lakes Genetic Variation Genome, Viral - genetics Genomes Harbors Lakes Lakes - virology Likelihood Functions Marine ecosystems Mesotrophic lakes Metagenomics - methods Microorganisms Microviridae Oligotrophic lakes Phylogenetics Phylogeny Proteins Sequence Homology, Nucleic Acid Species richness Species Specificity Taxonomy Viruses Viruses - classification Viruses - genetics France France, Aquitaine, Pavin L France, Rhone-Alpes, Bourget L Metagenomics Freshwater Viral Communities
ISSN:	1932-6203, 1932-6203
Online Access:	Get full text
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