Improving cold storage and processing traits in potato through targeted gene knockout
Cold storage of potato tubers is commonly used to reduce sprouting and extend postharvest shelf life. However, cold temperature stimulates the accumulation of reducing sugars in potato tubers. Upon high‐temperature processing, these reducing sugars react with free amino acids, resulting in brown, bi...
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| Published in: | Plant biotechnology journal Vol. 14; no. 1; pp. 169 - 176 |
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| Main Authors: | , , , , , , , , , , , , , , , , , |
| Format: | Journal Article |
| Language: | English |
| Published: |
England
Blackwell Pub
01.01.2016
John Wiley & Sons, Inc John Wiley and Sons Inc |
| Subjects: | |
| ISSN: | 1467-7644, 1467-7652, 1467-7652 |
| Online Access: | Get full text |
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| Abstract | Cold storage of potato tubers is commonly used to reduce sprouting and extend postharvest shelf life. However, cold temperature stimulates the accumulation of reducing sugars in potato tubers. Upon high‐temperature processing, these reducing sugars react with free amino acids, resulting in brown, bitter‐tasting products and elevated levels of acrylamide—a potential carcinogen. To minimize the accumulation of reducing sugars, RNA interference (RNAi) technology was used to silence the vacuolar invertase gene (VInv), which encodes a protein that breaks down sucrose to glucose and fructose. Because RNAi often results in incomplete gene silencing and requires the plant to be transgenic, here we used transcription activator‐like effector nucleases (TALENs) to knockout VInv within the commercial potato variety, Ranger Russet. We isolated 18 plants containing mutations in at least one VInv allele, and five of these plants had mutations in all VInv alleles. Tubers from full VInv‐knockout plants had undetectable levels of reducing sugars, and processed chips contained reduced levels of acrylamide and were lightly coloured. Furthermore, seven of the 18 modified plant lines appeared to contain no TALEN DNA insertions in the potato genome. These results provide a framework for using TALENs to quickly improve traits in commercially relevant autotetraploid potato lines. |
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| AbstractList | Cold storage of potato tubers is commonly used to reduce sprouting and extend postharvest shelf life. However, cold temperature stimulates the accumulation of reducing sugars in potato tubers. Upon high‐temperature processing, these reducing sugars react with free amino acids, resulting in brown, bitter‐tasting products and elevated levels of acrylamide—a potential carcinogen. To minimize the accumulation of reducing sugars, RNA interference (RNAi) technology was used to silence the vacuolar invertase gene (VInv), which encodes a protein that breaks down sucrose to glucose and fructose. Because RNAi often results in incomplete gene silencing and requires the plant to be transgenic, here we used transcription activator‐like effector nucleases (TALENs) to knockout VInv within the commercial potato variety, Ranger Russet. We isolated 18 plants containing mutations in at least one VInv allele, and five of these plants had mutations in all VInv alleles. Tubers from full VInv‐knockout plants had undetectable levels of reducing sugars, and processed chips contained reduced levels of acrylamide and were lightly coloured. Furthermore, seven of the 18 modified plant lines appeared to contain no TALEN DNA insertions in the potato genome. These results provide a framework for using TALENs to quickly improve traits in commercially relevant autotetraploid potato lines. Cold storage of potato tubers is commonly used to reduce sprouting and extend postharvest shelf life. However, cold temperature stimulates the accumulation of reducing sugars in potato tubers. Upon high‐temperature processing, these reducing sugars react with free amino acids, resulting in brown, bitter‐tasting products and elevated levels of acrylamide—a potential carcinogen. To minimize the accumulation of reducing sugars, RNA interference (RNAi) technology was used to silence the vacuolar invertase gene ( VInv ), which encodes a protein that breaks down sucrose to glucose and fructose. Because RNAi often results in incomplete gene silencing and requires the plant to be transgenic, here we used transcription activator‐like effector nucleases (TALENs) to knockout VInv within the commercial potato variety, Ranger Russet. We isolated 18 plants containing mutations in at least one VInv allele, and five of these plants had mutations in all VInv alleles. Tubers from full VInv‐ knockout plants had undetectable levels of reducing sugars, and processed chips contained reduced levels of acrylamide and were lightly coloured. Furthermore, seven of the 18 modified plant lines appeared to contain no TALEN DNA insertions in the potato genome. These results provide a framework for using TALENs to quickly improve traits in commercially relevant autotetraploid potato lines. Summary Cold storage of potato tubers is commonly used to reduce sprouting and extend postharvest shelf life. However, cold temperature stimulates the accumulation of reducing sugars in potato tubers. Upon high‐temperature processing, these reducing sugars react with free amino acids, resulting in brown, bitter‐tasting products and elevated levels of acrylamide—a potential carcinogen. To minimize the accumulation of reducing sugars, RNA interference (RNAi) technology was used to silence the vacuolar invertase gene (VInv), which encodes a protein that breaks down sucrose to glucose and fructose. Because RNAi often results in incomplete gene silencing and requires the plant to be transgenic, here we used transcription activator‐like effector nucleases (TALENs) to knockout VInv within the commercial potato variety, Ranger Russet. We isolated 18 plants containing mutations in at least one VInv allele, and five of these plants had mutations in all VInv alleles. Tubers from full VInv‐knockout plants had undetectable levels of reducing sugars, and processed chips contained reduced levels of acrylamide and were lightly coloured. Furthermore, seven of the 18 modified plant lines appeared to contain no TALEN DNA insertions in the potato genome. These results provide a framework for using TALENs to quickly improve traits in commercially relevant autotetraploid potato lines. Cold storage of potato tubers is commonly used to reduce sprouting and extend postharvest shelf life. However, cold temperature stimulates the accumulation of reducing sugars in potato tubers. Upon high-temperature processing, these reducing sugars react with free amino acids, resulting in brown, bitter-tasting products and elevated levels of acrylamide--a potential carcinogen. To minimize the accumulation of reducing sugars, RNA interference (RNAi) technology was used to silence the vacuolar invertase gene (VInv), which encodes a protein that breaks down sucrose to glucose and fructose. Because RNAi often results in incomplete gene silencing and requires the plant to be transgenic, here we used transcription activator-like effector nucleases (TALENs) to knockout VInv within the commercial potato variety, Ranger Russet. We isolated 18 plants containing mutations in at least one VInv allele, and five of these plants had mutations in all VInv alleles. Tubers from full VInv-knockout plants had undetectable levels of reducing sugars, and processed chips contained reduced levels of acrylamide and were lightly coloured. Furthermore, seven of the 18 modified plant lines appeared to contain no TALEN DNA insertions in the potato genome. These results provide a framework for using TALENs to quickly improve traits in commercially relevant autotetraploid potato lines.Cold storage of potato tubers is commonly used to reduce sprouting and extend postharvest shelf life. However, cold temperature stimulates the accumulation of reducing sugars in potato tubers. Upon high-temperature processing, these reducing sugars react with free amino acids, resulting in brown, bitter-tasting products and elevated levels of acrylamide--a potential carcinogen. To minimize the accumulation of reducing sugars, RNA interference (RNAi) technology was used to silence the vacuolar invertase gene (VInv), which encodes a protein that breaks down sucrose to glucose and fructose. Because RNAi often results in incomplete gene silencing and requires the plant to be transgenic, here we used transcription activator-like effector nucleases (TALENs) to knockout VInv within the commercial potato variety, Ranger Russet. We isolated 18 plants containing mutations in at least one VInv allele, and five of these plants had mutations in all VInv alleles. Tubers from full VInv-knockout plants had undetectable levels of reducing sugars, and processed chips contained reduced levels of acrylamide and were lightly coloured. Furthermore, seven of the 18 modified plant lines appeared to contain no TALEN DNA insertions in the potato genome. These results provide a framework for using TALENs to quickly improve traits in commercially relevant autotetraploid potato lines. |
| Author | Clasen, Benjamin M Baltes, Nicholas J Luo, Song Demorest, Zachary L Stoddard, Thomas J Ray, Erin E Haun, William Tibebu, Redeat Daulhac, Aurelie Retterath, Adam Davison, Shawn Mathis, Luc Cedrone, Frederic Voytas, Daniel F Yabandith, Ann Li, Jin Coffman, Andrew Zhang, Feng |
| AuthorAffiliation | 1 Cellectis plant sciences Inc. New Brighton MN USA 2 Cellectis SA Paris France |
| AuthorAffiliation_xml | – name: 2 Cellectis SA Paris France – name: 1 Cellectis plant sciences Inc. New Brighton MN USA |
| Author_xml | – sequence: 1 fullname: Clasen, Benjamin M – sequence: 2 fullname: Stoddard, Thomas J – sequence: 3 fullname: Luo, Song – sequence: 4 fullname: Demorest, Zachary L – sequence: 5 fullname: Li, Jin – sequence: 6 fullname: Cedrone, Frederic – sequence: 7 fullname: Tibebu, Redeat – sequence: 8 fullname: Davison, Shawn – sequence: 9 fullname: Ray, Erin E – sequence: 10 fullname: Daulhac, Aurelie – sequence: 11 fullname: Coffman, Andrew – sequence: 12 fullname: Yabandith, Ann – sequence: 13 fullname: Retterath, Adam – sequence: 14 fullname: Haun, William – sequence: 15 fullname: Baltes, Nicholas J – sequence: 16 fullname: Mathis, Luc – sequence: 17 fullname: Voytas, Daniel F – sequence: 18 fullname: Zhang, Feng |
| BackLink | https://www.ncbi.nlm.nih.gov/pubmed/25846201$$D View this record in MEDLINE/PubMed |
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| Copyright | 2015 Society for Experimental Biology, Association of Applied Biologists and John Wiley & Sons Ltd 2015 Society for Experimental Biology, Association of Applied Biologists and John Wiley & Sons Ltd. 2016. This work is published under https://creativecommons.org/licenses/by/4.0/ (the "License"). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. |
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| Keywords | acrylamide reduction vacuolar invertase cold-induced sweetening gene editing transcription activator-like effector nucleases potato |
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| Snippet | Cold storage of potato tubers is commonly used to reduce sprouting and extend postharvest shelf life. However, cold temperature stimulates the accumulation of... Summary Cold storage of potato tubers is commonly used to reduce sprouting and extend postharvest shelf life. However, cold temperature stimulates the... |
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| SubjectTerms | Acrylamide Acrylamide - analysis acrylamide reduction acrylamides alleles Amino acids Autotetraploid Base Sequence beta-fructofuranosidase beta-Fructofuranosidase - genetics Bitter taste Carbohydrates - analysis Carcinogens Chips cold Cold storage Cold Temperature cold‐induced sweetening Cryopreservation - methods Deoxyribonucleic acid DNA free amino acids Fructose gene editing Gene expression Gene Knockout Techniques Gene silencing Gene Targeting Genes Genes, Plant Genomes Glucose Interference Invertase Mutation Mutation - genetics Mutations Nuclease nucleases Plants (organisms) Plants, Genetically Modified potato Potatoes reducing sugars Ribonucleic acid RNA RNA interference RNA-mediated interference Shelf life Silence Solanum tuberosum Solanum tuberosum - genetics sprouting Sucrose Sugar Sugars temperature Temperature effects Temporal variations Transcription Transcription activator-like effector nucleases Transcription Activator-Like Effector Nucleases - metabolism Transgenic plants Tubers vacuolar invertase vacuoles Vacuoles - enzymology Vegetables |
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| Title | Improving cold storage and processing traits in potato through targeted gene knockout |
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