plyranges: a grammar of genomic data transformation

Bioconductor is a widely used R-based platform for genomics, but its host of complex genomic data structures places a cognitive burden on the user. For most tasks, the GRanges object would suffice, but there are gaps in the API that prevent its general use. By recognizing that the GRanges class foll...

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Veröffentlicht in:	Genome Biology Jg. 20; H. 1; S. 4
Hauptverfasser:	Lee, Stuart, Cook, Dianne, Lawrence, Michael
Format:	Journal Article
Sprache:	Englisch
Veröffentlicht:	London BioMed Central 04.01.2019 Springer Nature B.V BMC
Schlagworte:	Algebra Animal Genetics and Genomics Application programming interface Batch processing Bioconductor Bioinformatics Biology Biomedical and Life Sciences class cognition Cognitive ability Data analysis Data processing Datasets Evolutionary Biology genome Genomes Genomics Genomics - methods Grammar Human Genetics infrastructure Interoperability Language Life Sciences Microbial Genetics and Genomics Plant Genetics and Genomics Software Terminology as Topic Australia Data analysis Genomes Bioconductor Grammar
ISSN:	1474-760X, 1474-7596, 1474-760X
Online-Zugang:	Volltext
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