riboviz: analysis and visualization of ribosome profiling datasets

Background Using high-throughput sequencing to monitor translation in vivo, ribosome profiling can provide critical insights into the dynamics and regulation of protein synthesis in a cell. Since its introduction in 2009, this technique has played a key role in driving biological discovery, and yet...

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Bibliographic Details
Published in:	BMC bioinformatics Vol. 18; no. 1; pp. 461 - 4
Main Authors:	Carja, Oana, Xing, Tongji, Wallace, Edward W. J., Plotkin, Joshua B., Shah, Premal
Format:	Journal Article
Language:	English
Published:	London BioMed Central 25.10.2017 BioMed Central Ltd Springer Nature B.V BMC
Subjects:	Algorithms Applications programs Bias Bioinformatics Biomedical and Life Sciences Computation Computational Biology/Bioinformatics Computer Appl. in Life Sciences Computer applications Data processing Datasets Diagnosis Exploration Footprints Gene expression Gene regulation Genomes Life Sciences Microarrays Next-generation sequencing Pipelines Protein biosynthesis Protein synthesis Proteins Researchers Ribosome profiling Ribosomes Sequence analysis (applications) Source code Stem cells Transcription Transcription (Genetics) Translation quantification Visualization Visualization (Computer) Visualization and comparison tool-kit Yeast Database Translation quantification Visualization and comparison tool-kit Ribosome profiling
ISSN:	1471-2105, 1471-2105
Online Access:	Get full text
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