On-Demand Indexing for Referential Compression of DNA Sequences

The decreasing costs of genome sequencing is creating a demand for scalable storage and processing tools and techniques to deal with the large amounts of generated data. Referential compression is one of these techniques, in which the similarity between the DNA of organisms of the same or an evoluti...

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Bibliographic Details
Published in:	PloS one Vol. 10; no. 7; p. e0132460
Main Authors:	Alves, Fernando, Cogo, Vinicius, Wandelt, Sebastian, Leser, Ulf, Bessani, Alysson
Format:	Journal Article
Language:	English
Published:	United States Public Library of Science 06.07.2015 Public Library of Science (PLoS)
Subjects:	Algorithms Bioinformatics Biological evolution Chromosomes Compression Computer science Data compression Data Compression - methods Demand Deoxyribonucleic acid DNA DNA sequencing Gene sequencing Genomes Genomics Genomics - methods Humans Indexing Indexing (Content analysis) Molecular biology Nucleotide sequence Ratios Sequence Analysis, DNA - methods Software Storage
ISSN:	1932-6203, 1932-6203
Online Access:	Get full text
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