Enriching a biomedical event corpus with meta-knowledge annotation

Background Biomedical papers contain rich information about entities, facts and events of biological relevance. To discover these automatically, we use text mining techniques, which rely on annotated corpora for training. In order to extract protein-protein interactions, genotype-phenotype/gene-dise...

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Published in:BMC bioinformatics Vol. 12; no. 1; p. 393
Main Authors: Thompson, Paul, Nawaz, Raheel, McNaught, John, Ananiadou, Sophia
Format: Journal Article
Language:English
Published: London BioMed Central 10.10.2011
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ISSN:1471-2105, 1471-2105
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Abstract Background Biomedical papers contain rich information about entities, facts and events of biological relevance. To discover these automatically, we use text mining techniques, which rely on annotated corpora for training. In order to extract protein-protein interactions, genotype-phenotype/gene-disease associations, etc., we rely on event corpora that are annotated with classified, structured representations of important facts and findings contained within text. These provide an important resource for the training of domain-specific information extraction (IE) systems, to facilitate semantic-based searching of documents. Correct interpretation of these events is not possible without additional information, e.g., does an event describe a fact, a hypothesis, an experimental result or an analysis of results? How confident is the author about the validity of her analyses? These and other types of information, which we collectively term meta-knowledge , can be derived from the context of the event. Results We have designed an annotation scheme for meta-knowledge enrichment of biomedical event corpora. The scheme is multi-dimensional, in that each event is annotated for 5 different aspects of meta-knowledge that can be derived from the textual context of the event. Textual clues used to determine the values are also annotated. The scheme is intended to be general enough to allow integration with different types of bio-event annotation, whilst being detailed enough to capture important subtleties in the nature of the meta-knowledge expressed in the text. We report here on both the main features of the annotation scheme, as well as its application to the GENIA event corpus (1000 abstracts with 36,858 events). High levels of inter-annotator agreement have been achieved, falling in the range of 0.84-0.93 Kappa. Conclusion By augmenting event annotations with meta-knowledge, more sophisticated IE systems can be trained, which allow interpretative information to be specified as part of the search criteria. This can assist in a number of important tasks, e.g., finding new experimental knowledge to facilitate database curation, enabling textual inference to detect entailments and contradictions, etc. To our knowledge, our scheme is unique within the field with regards to the diversity of meta-knowledge aspects annotated for each event.
AbstractList Background Biomedical papers contain rich information about entities, facts and events of biological relevance. To discover these automatically, we use text mining techniques, which rely on annotated corpora for training. In order to extract protein-protein interactions, genotype-phenotype/gene-disease associations, etc., we rely on event corpora that are annotated with classified, structured representations of important facts and findings contained within text. These provide an important resource for the training of domain-specific information extraction (IE) systems, to facilitate semantic-based searching of documents. Correct interpretation of these events is not possible without additional information, e.g., does an event describe a fact, a hypothesis, an experimental result or an analysis of results? How confident is the author about the validity of her analyses? These and other types of information, which we collectively term meta-knowledge, can be derived from the context of the event. Results We have designed an annotation scheme for meta-knowledge enrichment of biomedical event corpora. The scheme is multi-dimensional, in that each event is annotated for 5 different aspects of meta-knowledge that can be derived from the textual context of the event. Textual clues used to determine the values are also annotated. The scheme is intended to be general enough to allow integration with different types of bio-event annotation, whilst being detailed enough to capture important subtleties in the nature of the meta-knowledge expressed in the text. We report here on both the main features of the annotation scheme, as well as its application to the GENIA event corpus (1000 abstracts with 36,858 events). High levels of inter-annotator agreement have been achieved, falling in the range of 0.84-0.93 Kappa. Conclusion By augmenting event annotations with meta-knowledge, more sophisticated IE systems can be trained, which allow interpretative information to be specified as part of the search criteria. This can assist in a number of important tasks, e.g., finding new experimental knowledge to facilitate database curation, enabling textual inference to detect entailments and contradictions, etc. To our knowledge, our scheme is unique within the field with regards to the diversity of meta-knowledge aspects annotated for each event.
Biomedical papers contain rich information about entities, facts and events of biological relevance. To discover these automatically, we use text mining techniques, which rely on annotated corpora for training. In order to extract protein-protein interactions, genotype-phenotype/gene-disease associations, etc., we rely on event corpora that are annotated with classified, structured representations of important facts and findings contained within text. These provide an important resource for the training of domain-specific information extraction (IE) systems, to facilitate semantic-based searching of documents. Correct interpretation of these events is not possible without additional information, e.g., does an event describe a fact, a hypothesis, an experimental result or an analysis of results? How confident is the author about the validity of her analyses? These and other types of information, which we collectively term meta-knowledge, can be derived from the context of the event.BACKGROUNDBiomedical papers contain rich information about entities, facts and events of biological relevance. To discover these automatically, we use text mining techniques, which rely on annotated corpora for training. In order to extract protein-protein interactions, genotype-phenotype/gene-disease associations, etc., we rely on event corpora that are annotated with classified, structured representations of important facts and findings contained within text. These provide an important resource for the training of domain-specific information extraction (IE) systems, to facilitate semantic-based searching of documents. Correct interpretation of these events is not possible without additional information, e.g., does an event describe a fact, a hypothesis, an experimental result or an analysis of results? How confident is the author about the validity of her analyses? These and other types of information, which we collectively term meta-knowledge, can be derived from the context of the event.We have designed an annotation scheme for meta-knowledge enrichment of biomedical event corpora. The scheme is multi-dimensional, in that each event is annotated for 5 different aspects of meta-knowledge that can be derived from the textual context of the event. Textual clues used to determine the values are also annotated. The scheme is intended to be general enough to allow integration with different types of bio-event annotation, whilst being detailed enough to capture important subtleties in the nature of the meta-knowledge expressed in the text. We report here on both the main features of the annotation scheme, as well as its application to the GENIA event corpus (1000 abstracts with 36,858 events). High levels of inter-annotator agreement have been achieved, falling in the range of 0.84-0.93 Kappa.RESULTSWe have designed an annotation scheme for meta-knowledge enrichment of biomedical event corpora. The scheme is multi-dimensional, in that each event is annotated for 5 different aspects of meta-knowledge that can be derived from the textual context of the event. Textual clues used to determine the values are also annotated. The scheme is intended to be general enough to allow integration with different types of bio-event annotation, whilst being detailed enough to capture important subtleties in the nature of the meta-knowledge expressed in the text. We report here on both the main features of the annotation scheme, as well as its application to the GENIA event corpus (1000 abstracts with 36,858 events). High levels of inter-annotator agreement have been achieved, falling in the range of 0.84-0.93 Kappa.By augmenting event annotations with meta-knowledge, more sophisticated IE systems can be trained, which allow interpretative information to be specified as part of the search criteria. This can assist in a number of important tasks, e.g., finding new experimental knowledge to facilitate database curation, enabling textual inference to detect entailments and contradictions, etc. To our knowledge, our scheme is unique within the field with regards to the diversity of meta-knowledge aspects annotated for each event.CONCLUSIONBy augmenting event annotations with meta-knowledge, more sophisticated IE systems can be trained, which allow interpretative information to be specified as part of the search criteria. This can assist in a number of important tasks, e.g., finding new experimental knowledge to facilitate database curation, enabling textual inference to detect entailments and contradictions, etc. To our knowledge, our scheme is unique within the field with regards to the diversity of meta-knowledge aspects annotated for each event.
Biomedical papers contain rich information about entities, facts and events of biological relevance. To discover these automatically, we use text mining techniques, which rely on annotated corpora for training. In order to extract protein-protein interactions, genotype-phenotype/gene-disease associations, etc., we rely on event corpora that are annotated with classified, structured representations of important facts and findings contained within text. These provide an important resource for the training of domain-specific information extraction (IE) systems, to facilitate semantic-based searching of documents. Correct interpretation of these events is not possible without additional information, e.g., does an event describe a fact, a hypothesis, an experimental result or an analysis of results? How confident is the author about the validity of her analyses? These and other types of information, which we collectively term meta-knowledge, can be derived from the context of the event. We have designed an annotation scheme for meta-knowledge enrichment of biomedical event corpora. The scheme is multi-dimensional, in that each event is annotated for 5 different aspects of meta-knowledge that can be derived from the textual context of the event. Textual clues used to determine the values are also annotated. The scheme is intended to be general enough to allow integration with different types of bio-event annotation, whilst being detailed enough to capture important subtleties in the nature of the meta-knowledge expressed in the text. We report here on both the main features of the annotation scheme, as well as its application to the GENIA event corpus (1000 abstracts with 36,858 events). High levels of inter-annotator agreement have been achieved, falling in the range of 0.84-0.93 Kappa. By augmenting event annotations with meta-knowledge, more sophisticated IE systems can be trained, which allow interpretative information to be specified as part of the search criteria. This can assist in a number of important tasks, e.g., finding new experimental knowledge to facilitate database curation, enabling textual inference to detect entailments and contradictions, etc. To our knowledge, our scheme is unique within the field with regards to the diversity of meta-knowledge aspects annotated for each event.
Abstract Background: Biomedical papers contain rich information about entities, facts and events of biological relevance. To discover these automatically, we use text mining techniques, which rely on annotated corpora for training. In order to extract protein-protein interactions, genotype-phenotype/gene-disease associations, etc., we rely on event corpora that are annotated with classified, structured representations of important facts and findings contained within text. These provide an important resource for the training of domain-specific information extraction (IE) systems, to facilitate semantic-based searching of documents. Correct interpretation of these events is not possible without additional information, e.g., does an event describe a fact, a hypothesis, an experimental result or an analysis of results? How confident is the author about the validity of her analyses? These and other types of information, which we collectively term meta-knowledge , can be derived from the context of the event. Results: We have designed an annotation scheme for meta-knowledge enrichment of biomedical event corpora. The scheme is multi-dimensional, in that each event is annotated for 5 different aspects of meta-knowledge that can be derived from the textual context of the event. Textual clues used to determine the values are also annotated. The scheme is intended to be general enough to allow integration with different types of bio-event annotation, whilst being detailed enough to capture important subtleties in the nature of the meta-knowledge expressed in the text. We report here on both the main features of the annotation scheme, as well as its application to the GENIA event corpus (1000 abstracts with 36,858 events). High levels of inter-annotator agreement have been achieved, falling in the range of 0.84-0.93 Kappa. Conclusion: By augmenting event annotations with meta-knowledge, more sophisticated IE systems can be trained, which allow interpretative information to be specified as part of the search criteria. This can assist in a number of important tasks, e.g., finding new experimental knowledge to facilitate database curation, enabling textual inference to detect entailments and contradictions, etc. To our knowledge, our scheme is unique within the field with regards to the diversity of meta-knowledge aspects annotated for each event.
Biomedical papers contain rich information about entities, facts and events of biological relevance. To discover these automatically, we use text mining techniques, which rely on annotated corpora for training. In order to extract protein-protein interactions, genotype-phenotype/gene-disease associations, etc., we rely on event corpora that are annotated with classified, structured representations of important facts and findings contained within text. These provide an important resource for the training of domain-specific information extraction (IE) systems, to facilitate semantic-based searching of documents. Correct interpretation of these events is not possible without additional information, e.g., does an event describe a fact, a hypothesis, an experimental result or an analysis of results? How confident is the author about the validity of her analyses? These and other types of information, which we collectively term meta-knowledge, can be derived from the context of the event. We have designed an annotation scheme for meta-knowledge enrichment of biomedical event corpora. The scheme is multi-dimensional, in that each event is annotated for 5 different aspects of meta-knowledge that can be derived from the textual context of the event. Textual clues used to determine the values are also annotated. The scheme is intended to be general enough to allow integration with different types of bio-event annotation, whilst being detailed enough to capture important subtleties in the nature of the meta-knowledge expressed in the text. We report here on both the main features of the annotation scheme, as well as its application to the GENIA event corpus (1000 abstracts with 36,858 events). High levels of inter-annotator agreement have been achieved, falling in the range of 0.84-0.93 Kappa. By augmenting event annotations with meta-knowledge, more sophisticated IE systems can be trained, which allow interpretative information to be specified as part of the search criteria. This can assist in a number of important tasks, e.g., finding new experimental knowledge to facilitate database curation, enabling textual inference to detect entailments and contradictions, etc. To our knowledge, our scheme is unique within the field with regards to the diversity of meta-knowledge aspects annotated for each event.
Background Biomedical papers contain rich information about entities, facts and events of biological relevance. To discover these automatically, we use text mining techniques, which rely on annotated corpora for training. In order to extract protein-protein interactions, genotype-phenotype/gene-disease associations, etc., we rely on event corpora that are annotated with classified, structured representations of important facts and findings contained within text. These provide an important resource for the training of domain-specific information extraction (IE) systems, to facilitate semantic-based searching of documents. Correct interpretation of these events is not possible without additional information, e.g., does an event describe a fact, a hypothesis, an experimental result or an analysis of results? How confident is the author about the validity of her analyses? These and other types of information, which we collectively term meta-knowledge , can be derived from the context of the event. Results We have designed an annotation scheme for meta-knowledge enrichment of biomedical event corpora. The scheme is multi-dimensional, in that each event is annotated for 5 different aspects of meta-knowledge that can be derived from the textual context of the event. Textual clues used to determine the values are also annotated. The scheme is intended to be general enough to allow integration with different types of bio-event annotation, whilst being detailed enough to capture important subtleties in the nature of the meta-knowledge expressed in the text. We report here on both the main features of the annotation scheme, as well as its application to the GENIA event corpus (1000 abstracts with 36,858 events). High levels of inter-annotator agreement have been achieved, falling in the range of 0.84-0.93 Kappa. Conclusion By augmenting event annotations with meta-knowledge, more sophisticated IE systems can be trained, which allow interpretative information to be specified as part of the search criteria. This can assist in a number of important tasks, e.g., finding new experimental knowledge to facilitate database curation, enabling textual inference to detect entailments and contradictions, etc. To our knowledge, our scheme is unique within the field with regards to the diversity of meta-knowledge aspects annotated for each event.
ArticleNumber 393
Audience Academic
Author Thompson, Paul
McNaught, John
Ananiadou, Sophia
Nawaz, Raheel
AuthorAffiliation 1 National Centre for Text Mining, Manchester Interdisciplinary Biocentre, School of Computer Science, University of Manchester, 131 Princess Street, Manchester, M1 7DN, UK
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  surname: Nawaz
  fullname: Nawaz, Raheel
  organization: National Centre for Text Mining, Manchester Interdisciplinary Biocentre, School of Computer Science, University of Manchester
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  givenname: John
  surname: McNaught
  fullname: McNaught, John
  organization: National Centre for Text Mining, Manchester Interdisciplinary Biocentre, School of Computer Science, University of Manchester
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  givenname: Sophia
  surname: Ananiadou
  fullname: Ananiadou, Sophia
  organization: National Centre for Text Mining, Manchester Interdisciplinary Biocentre, School of Computer Science, University of Manchester
BackLink https://www.ncbi.nlm.nih.gov/pubmed/21985429$$D View this record in MEDLINE/PubMed
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Cites_doi 10.1016/j.ijmedinf.2006.05.002
10.3115/1699648.1699696
10.1093/bioinformatics/btm184
10.1186/1471-2105-8-50
10.1371/journal.pcbi.0040020
10.1038/75556
10.1186/1471-2105-7-356
10.1007/978-0-387-28624-2_4
10.1023/A:1007562322031
10.1016/j.artmed.2004.07.016
10.1016/j.tibtech.2006.10.002
10.1093/bioinformatics/btn381
10.3917/rfla.122.0097
10.1093/bib/bbm045
10.1093/bioinformatics/btg1046
10.1016/j.ijmedinf.2005.06.013
10.1186/1471-2105-9-10
10.1186/1471-2105-10-349
10.1093/applin/17.4.433
10.1109/69.469825
10.1186/1471-2105-9-S11-S10
10.1177/0741088396013002004
10.1016/j.jbi.2003.10.001
10.1186/1471-2105-9-S3-S5
10.1093/bib/6.1.57
10.1186/1471-2105-9-S11-S9
10.1177/001316446002000104
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Copyright ©2011 Thompson et al; licensee BioMed Central Ltd. 2011 Thompson et al; licensee BioMed Central Ltd.
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References P Zweigenbaum (4901_CR7) 2007; 8
4901_CR15
P Zweigenbaum (4901_CR6) 2007
H Langer (4901_CR35) 2004
J Kim (4901_CR14) 2008; 9
P Ruch (4901_CR33) 2007; 76
H Shatkay (4901_CR44) 2008; 24
P Thompson (4901_CR13) 2009; 10
KB Cohen (4901_CR3) 2008; 4
V Rizomilioti (4901_CR26) 2006
A de Waard (4901_CR16) 2009
WJ Wilbur (4901_CR43) 2006; 7
L Hoye (4901_CR46) 1997
M Liakata (4901_CR39) 2010
M Ashburner (4901_CR18) 2000; 25
4901_CR48
4901_CR49
B Medlock (4901_CR23) 2007
L McKnight (4901_CR34) 2003
S Soderland (4901_CR11) 1999; 34
K Hyland (4901_CR24) 1996; 13
4901_CR47
(4901_CR1) 2006
V Vincze (4901_CR40) 2008; 9
F Lisacek (4901_CR20) 2005
O Sanchez-Graillet (4901_CR45) 2007; 23
Y Mizuta (4901_CR31) 2006; 75
K Oda (4901_CR17) 2008; 9
J Cohen (4901_CR50) 1960; 20
R Bunescu (4901_CR52) 2005; 33
H Kilicoglu (4901_CR27) 2008; 9
4901_CR37
K Hyland (4901_CR25) 1996; 17
4901_CR38
A de Waard (4901_CR41) 2009
J Ding (4901_CR5) 2002
R Nawaz (4901_CR21) 2010
M Light (4901_CR22) 2004
JT Kim (4901_CR10) 1995; 7
K Hirohata (4901_CR36) 2008
S Teufel (4901_CR51) 2009
ME Califf (4901_CR12) 2003; 4
Á Sándor (4901_CR29) 2007; 200
AM Cohen (4901_CR2) 2005; 6
P Thompson (4901_CR28) 2008
AS Yeh (4901_CR19) 2003; 19
K Hyland (4901_CR30) 2005
S Teufel (4901_CR32) 1999
Y Miyao (4901_CR9) 2006
S Ananiadou (4901_CR4) 2006; 24
VL Rubin (4901_CR42) 2007
A Rzhetsky (4901_CR8) 2004; 37
References_xml – ident: 4901_CR37
– volume: 76
  start-page: 195
  issue: 2-3
  year: 2007
  ident: 4901_CR33
  publication-title: Int J Med Inf
  doi: 10.1016/j.ijmedinf.2006.05.002
– start-page: 212
  volume-title: Proceedings of SMBM
  year: 2005
  ident: 4901_CR20
– start-page: 1017
  volume-title: Proceedings of ACL
  year: 2006
  ident: 4901_CR9
– volume-title: Metadiscourse: Exploring interaction in writing
  year: 2005
  ident: 4901_CR30
– start-page: 992
  volume-title: Proceedings of ACL
  year: 2007
  ident: 4901_CR23
– start-page: 1493
  volume-title: Proceedings of EMNLP
  year: 2009
  ident: 4901_CR51
  doi: 10.3115/1699648.1699696
– volume-title: Proceedings of the Workshop on Semantic Web Applications in Scientific Discourse
  year: 2009
  ident: 4901_CR16
– volume: 23
  start-page: i424
  issue: 13
  year: 2007
  ident: 4901_CR45
  publication-title: Bioinformatics
  doi: 10.1093/bioinformatics/btm184
– ident: 4901_CR47
– volume-title: Text Mining for Biology and Biomedicine
  year: 2006
  ident: 4901_CR1
– ident: 4901_CR15
  doi: 10.1186/1471-2105-8-50
– volume: 4
  start-page: e20
  issue: 1
  year: 2008
  ident: 4901_CR3
  publication-title: PLoS Comput Biol
  doi: 10.1371/journal.pcbi.0040020
– volume: 25
  start-page: 25
  issue: 1
  year: 2000
  ident: 4901_CR18
  publication-title: Nat Genet
  doi: 10.1038/75556
– volume: 7
  start-page: 356
  year: 2006
  ident: 4901_CR43
  publication-title: BMC Bioinformatics
  doi: 10.1186/1471-2105-7-356
– start-page: 381
  volume-title: 3rd International Joint Conference on Natural Language Processing
  year: 2008
  ident: 4901_CR36
– start-page: 141
  volume-title: Proceedings of NAACL-HLT
  year: 2007
  ident: 4901_CR42
– start-page: 53
  volume-title: Information Technology in Languages for Specific Purposes
  year: 2006
  ident: 4901_CR26
  doi: 10.1007/978-0-387-28624-2_4
– start-page: 351
  volume-title: Proceedings of the Eighth International Conference on Computational Semantics:
  year: 2009
  ident: 4901_CR41
– volume-title: Proceedings of the ACL Workshop on Discourse Annotation
  year: 2004
  ident: 4901_CR35
– start-page: 110
  volume-title: Proceedings of EACL
  year: 1999
  ident: 4901_CR32
– volume: 34
  start-page: 233
  issue: 1
  year: 1999
  ident: 4901_CR11
  publication-title: Machine Learning
  doi: 10.1023/A:1007562322031
– volume-title: Adverbs and modality in English: Longman
  year: 1997
  ident: 4901_CR46
– volume: 33
  start-page: 139
  issue: 2
  year: 2005
  ident: 4901_CR52
  publication-title: Artif Intell Med
  doi: 10.1016/j.artmed.2004.07.016
– start-page: 17
  volume-title: Proceedings of the BioLink 2004 Workshop at HLT/NAACL
  year: 2004
  ident: 4901_CR22
– volume: 24
  start-page: 571
  issue: 12
  year: 2006
  ident: 4901_CR4
  publication-title: Trends Biotechnol
  doi: 10.1016/j.tibtech.2006.10.002
– start-page: 326
  volume-title: Proceedings of Pac Symp Biocomput
  year: 2002
  ident: 4901_CR5
– volume: 24
  start-page: 2086
  issue: 18
  year: 2008
  ident: 4901_CR44
  publication-title: Bioinformatics
  doi: 10.1093/bioinformatics/btn381
– start-page: 27
  volume-title: Proceedings of the LREC 2008 Workshop on Building and Evaluating Resources for Biomedical Text Mining
  year: 2008
  ident: 4901_CR28
– volume: 200
  start-page: 97
  issue: 2
  year: 2007
  ident: 4901_CR29
  publication-title: Revue Française de Linguistique Appliquée
  doi: 10.3917/rfla.122.0097
– volume: 8
  start-page: 358
  issue: 5
  year: 2007
  ident: 4901_CR7
  publication-title: Brief Bioinform
  doi: 10.1093/bib/bbm045
– volume: 19
  start-page: i331
  issue: Suppl 1
  year: 2003
  ident: 4901_CR19
  publication-title: Bioinformatics
  doi: 10.1093/bioinformatics/btg1046
– ident: 4901_CR49
– start-page: 69
  volume-title: Proceedings of the Workshop on Negation and Speculation in Natural Language Processing
  year: 2010
  ident: 4901_CR21
– volume: 75
  start-page: 468
  issue: 6
  year: 2006
  ident: 4901_CR31
  publication-title: Int J Med Inf
  doi: 10.1016/j.ijmedinf.2005.06.013
– volume: 9
  start-page: 10
  year: 2008
  ident: 4901_CR14
  publication-title: BMC Bioinformatics
  doi: 10.1186/1471-2105-9-10
– volume: 10
  start-page: 349
  year: 2009
  ident: 4901_CR13
  publication-title: BMC Bioinformatics
  doi: 10.1186/1471-2105-10-349
– ident: 4901_CR38
– volume: 17
  start-page: 433
  issue: 4
  year: 1996
  ident: 4901_CR25
  publication-title: Applied Linguistics
  doi: 10.1093/applin/17.4.433
– start-page: 2054
  volume-title: Proceedings of LREC
  year: 2010
  ident: 4901_CR39
– volume: 7
  start-page: 713
  issue: 5
  year: 1995
  ident: 4901_CR10
  publication-title: IEEE Transactions on Knowledge and Data Engineering
  doi: 10.1109/69.469825
– volume: 9
  start-page: S10
  issue: Suppl 11
  year: 2008
  ident: 4901_CR27
  publication-title: BMC Bioinformatics
  doi: 10.1186/1471-2105-9-S11-S10
– volume: 13
  start-page: 251
  issue: 2
  year: 1996
  ident: 4901_CR24
  publication-title: Written Communication
  doi: 10.1177/0741088396013002004
– ident: 4901_CR48
– volume: 4
  start-page: 177
  year: 2003
  ident: 4901_CR12
  publication-title: The Journal of Machine Learning Research
– volume: 37
  start-page: 43
  issue: 1
  year: 2004
  ident: 4901_CR8
  publication-title: J Biomed Inform
  doi: 10.1016/j.jbi.2003.10.001
– volume: 9
  start-page: S5
  issue: Suppl 3
  year: 2008
  ident: 4901_CR17
  publication-title: BMC Bioinformatics
  doi: 10.1186/1471-2105-9-S3-S5
– volume: 6
  start-page: 57
  issue: 1
  year: 2005
  ident: 4901_CR2
  publication-title: Brief Bioinform
  doi: 10.1093/bib/6.1.57
– start-page: 205
  volume-title: Proceedings of Pac Symp Biocomput
  year: 2007
  ident: 4901_CR6
– volume: 9
  start-page: S9
  issue: Suppl 11
  year: 2008
  ident: 4901_CR40
  publication-title: BMC Bioinformatics
  doi: 10.1186/1471-2105-9-S11-S9
– volume: 20
  start-page: 37
  year: 1960
  ident: 4901_CR50
  publication-title: Educational and psychological measurement
  doi: 10.1177/001316446002000104
– start-page: 440
  volume-title: AMIA Annu Symp Proc
  year: 2003
  ident: 4901_CR34
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Snippet Background Biomedical papers contain rich information about entities, facts and events of biological relevance. To discover these automatically, we use text...
Biomedical papers contain rich information about entities, facts and events of biological relevance. To discover these automatically, we use text mining...
Background Biomedical papers contain rich information about entities, facts and events of biological relevance. To discover these automatically, we use text...
Abstract Background: Biomedical papers contain rich information about entities, facts and events of biological relevance. To discover these automatically, we...
Background: Biomedical papers contain rich information about entities, facts and events of biological relevance. To discover these automatically, we use text...
Abstract Background Biomedical papers contain rich information about entities, facts and events of biological relevance. To discover these automatically, we...
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Analysis
Bioinformatics
Biological diversity
Biomedical and Life Sciences
Computational Biology/Bioinformatics
Computer Appl. in Life Sciences
Data Mining
Database Management Systems
Humans
Indexing in process
Information Storage and Retrieval
Information Systems
Knowledge
Life Sciences
Microarrays
Networks analysis
Physiological aspects
Protein-protein interactions
Research Article
Semantics
Training
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Title Enriching a biomedical event corpus with meta-knowledge annotation
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