TCGAplot: an R package for integrative pan-cancer analysis and visualization of TCGA multi-omics data

Background Pan-cancer analysis examines both the commonalities and heterogeneity among genomic and cellular alterations across numerous types of tumors. Pan-cancer analysis of gene expression, tumor mutational burden (TMB), microsatellite instability (MSI), and tumor immune microenvironment (TIME),...

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Bibliographic Details
Published in:	BMC bioinformatics Vol. 24; no. 1; pp. 483 - 15
Main Authors:	Liao, Chenqi, Wang, Xiong
Format:	Journal Article
Language:	English
Published:	London BioMed Central 17.12.2023 BioMed Central Ltd Springer Nature B.V BMC
Subjects:	Algorithms Analysis Bioinformatics Biological analysis Biomedical and Life Sciences Building codes Cancer Chemokines Computational Biology/Bioinformatics Computer Appl. in Life Sciences Correlation analysis Diagnosis DNA methylation DNA sequencing Functionals Gene expression Genetic aspects Genomes Genomics Heterogeneity Life Sciences Medical research Methylation Microarrays Microenvironments Microsatellite instability Mutation Nucleotide sequencing Ontology Pan-cancer analysis Regression analysis Software Source code Stability analysis Survival Survival analysis TCGA TCGAplot Tumors User-defined function Visualization China Visualization Pan-cancer analysis User-defined function TCGAplot TCGA
ISSN:	1471-2105, 1471-2105
Online Access:	Get full text
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