Whole-genome sequence analysis of clinically isolated carbapenem resistant Escherichia coli from Iran

Background The emergence of carbapenem-resistant Enterobacterales (CRE) continues to threaten public health due to limited therapeutic options. In the current study the incidence of carbapenem resistance among the 104 clinical isolates of Escherichia coli and the genomic features of carbapenem resis...

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Bibliographic Details
Published in:	BMC microbiology Vol. 23; no. 1; pp. 49 - 10
Main Authors:	Haeili, Mehri, Barmudeh, Samaneh, Omrani, Maryam, Zeinalzadeh, Narges, Kafil, Hossein Samadi, Batignani, Virginia, Ghodousi, Arash, Cirillo, Daniela Maria
Format:	Journal Article
Language:	English
Published:	London BioMed Central 27.02.2023 BioMed Central Ltd Springer Nature B.V BMC
Subjects:	Amikacin Amino acids Analysis Antibiotics Antimicrobial agents Beta lactamases Biological Microscopy Biomedical and Life Sciences Carbapenem resistance Carbapenem-Resistant Enterobacteriaceae - genetics Carbapenemase Carbapenems - pharmacology Chromosomes Clinical isolates Colistin Colistin - pharmacology Dilution Disease control DNA sequencing Drug resistance Drug resistance in microorganisms E coli Enzymes Epidemiology Escherichia coli Escherichia coli - genetics Escherichia coli infections Escherichia coli Proteins Fosfomycin Gene sequencing Genes Genetic aspects Genomes Genomics Health aspects Identification and classification Imipenem Inactivation Infections Iran Life Sciences Microbiology Multilocus Sequence Typing Mycology NDM-1 NDM-5 Nitrofurantoin Nucleotide sequence Nucleotide sequencing Parasitology Plasmids Proteins Public health Risk factors RNA, Ribosomal, 16S rRNA (adenosine-2'-0'-)-methyltransferase rRNA 16S rRNA methyltransferase Sulbactam Susceptibility Tazobactam Tigecycline Virology Whole genome sequencing Iran NDM-1 Carbapenem resistance NDM-5 Whole genome sequencing Epidemiology Escherichia coli
ISSN:	1471-2180, 1471-2180
Online Access:	Get full text
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