DNAscan: personal computer compatible NGS analysis, annotation and visualisation

Background Next Generation Sequencing (NGS) is a commonly used technology for studying the genetic basis of biological processes and it underpins the aspirations of precision medicine. However, there are significant challenges when dealing with NGS data. Firstly, a huge number of bioinformatics tool...

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Bibliographic Details
Published in:	BMC bioinformatics Vol. 20; no. 1; pp. 213 - 10
Main Authors:	Iacoangeli, A., Al Khleifat, A., Sproviero, W., Shatunov, A., Jones, A. R., Morgan, S. L., Pittman, A., Dobson, R. J., Newhouse, S. J., Al-Chalabi, A.
Format:	Journal Article
Language:	English
Published:	London BioMed Central 27.04.2019 BioMed Central Ltd Springer Nature B.V BMC
Subjects:	Algorithms Amyotrophic lateral sclerosis Amyotrophic Lateral Sclerosis - genetics Amyotrophic Lateral Sclerosis - pathology Annotation Annotations Bioinformatics Biological activity Biomedical and Life Sciences Biomedical engineering Biomedical materials Biomedical research Cloud computing Computational biology Computational Biology - methods Computational Biology/Bioinformatics Computational efficiency Computer Appl. in Life Sciences Computer applications Computer memory Data analysis Databases, Factual Dementia Deoxyribonucleic acid Diagnostic software Diagnostic systems DNA DNA sequencing DNA, Bacterial - chemistry DNA, Bacterial - genetics DNA, Bacterial - metabolism Genetic engineering Genomes Genomics High-Throughput Nucleotide Sequencing HIV-1 - genetics Humans INDEL Mutation Infrastructure (Economics) Life Sciences Linux Medical research Medicine Methodology Methodology Article Methods Microarrays Next-generation sequencing Personal computers Pipeline design Pipelines (Computing) Polymorphism, Single Nucleotide Precision medicine Repeat expansion Research facilities RNA, Viral - chemistry RNA, Viral - genetics RNA, Viral - metabolism Sequence analysis (methods) Structural variants Technology User-Computer Interface Utilities Variant calling Viral detection Viral genetics Visualization Visualization (Computer) Whole Genome Sequencing United Kingdom Structural variants Viral detection Repeat expansion Bioinformatics Next generation sequencing Annotation Variant calling
ISSN:	1471-2105, 1471-2105
Online Access:	Get full text
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