MUMmer4: A fast and versatile genome alignment system

The MUMmer system and the genome sequence aligner nucmer included within it are among the most widely used alignment packages in genomics. Since the last major release of MUMmer version 3 in 2004, it has been applied to many types of problems including aligning whole genome sequences, aligning reads...

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Bibliographic Details
Published in:	PLoS computational biology Vol. 14; no. 1; p. e1005944
Main Authors:	Marçais, Guillaume, Delcher, Arthur L., Phillippy, Adam M., Coston, Rachel, Salzberg, Steven L., Zimin, Aleksey
Format:	Journal Article
Language:	English
Published:	United States Public Library of Science 01.01.2018 Public Library of Science (PLoS)
Subjects:	Algorithms Alignment Animals Arabidopsis - genetics Bioinformatics Biological effects Biology Biology and Life Sciences Computational biology Computational Biology - methods Computer and Information Sciences Computer science Data structures Funding Gene sequencing Genome, Human Genome, Plant Genomes Genomics Humans Medicine Methods Models, Theoretical Nucleotide sequence Packages Pan troglodytes Parallel processing Perl Polymorphism, Single Nucleotide Programming Languages Query processing Research and Analysis Methods Sequence Alignment - methods Sequence Analysis, DNA Sequence Analysis, Protein Software United States > US Maryland Baltimore Maryland Pennsylvania
ISSN:	1553-7358, 1553-734X, 1553-7358
Online Access:	Get full text
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