A universal protocol to generate consensus level genome sequences for foot-and-mouth disease virus and other positive-sense polyadenylated RNA viruses using the Illumina MiSeq

Background Next-Generation Sequencing (NGS) is revolutionizing molecular epidemiology by providing new approaches to undertake whole genome sequencing (WGS) in diagnostic settings for a variety of human and veterinary pathogens. Previous sequencing protocols have been subject to biases such as those...

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Vydáno v:	BMC genomics Ročník 15; číslo 1; s. 828
Hlavní autoři:	Logan, Grace, Freimanis, Graham L, King, David J, Valdazo-González, Begoña, Bachanek-Bankowska, Katarzyna, Sanderson, Nicholas D, Knowles, Nick J, King, Donald P, Cottam, Eleanor M
Médium:	Journal Article
Jazyk:	angličtina
Vydáno:	London BioMed Central 30.09.2014 BioMed Central Ltd Springer Nature B.V
Témata:	Accuracy Animal Genetics and Genomics Binding sites Biomedical and Life Sciences DNA sequencing Epidemiology Foot & mouth disease Foot-and-mouth disease virus Foot-and-Mouth Disease Virus - classification Foot-and-Mouth Disease Virus - genetics Genes Genetic aspects Genome, Viral Genomes Genomics High-Throughput Nucleotide Sequencing Laboratories Life Sciences Methodology Methodology Article Microarrays Microbial Genetics and Genomics Molecular Sequence Data Non-human and non-rodent vertebrate genomics Nucleotide sequencing Physiological aspects Plant Genetics and Genomics Polyadenylation Proteomics RNA Viruses - classification RNA Viruses - genetics Sequence Analysis, RNA - methods Studies Viruses RNA Whole genome sequencing FMDV Foot-and-mouth disease virus Genome Next generation sequencing virus
ISSN:	1471-2164, 1471-2164
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