Complete vertebrate mitogenomes reveal widespread repeats and gene duplications

Background Modern sequencing technologies should make the assembly of the relatively small mitochondrial genomes an easy undertaking. However, few tools exist that address mitochondrial assembly directly. Results As part of the Vertebrate Genomes Project (VGP) we develop mitoVGP, a fully automated p...

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Vydáno v:	Genome Biology Ročník 22; číslo 1; s. 120
Hlavní autoři:	Formenti, Giulio, Rhie, Arang, Balacco, Jennifer, Haase, Bettina, Mountcastle, Jacquelyn, Fedrigo, Olivier, Brown, Samara, Capodiferro, Marco Rosario, Al-Ajli, Farooq O., Ambrosini, Roberto, Houde, Peter, Koren, Sergey, Oliver, Karen, Smith, Michelle, Skelton, Jason, Betteridge, Emma, Dolucan, Jale, Corton, Craig, Bista, Iliana, Torrance, James, Tracey, Alan, Wood, Jonathan, Uliano-Silva, Marcela, Howe, Kerstin, McCarthy, Shane, Winkler, Sylke, Kwak, Woori, Korlach, Jonas, Fungtammasan, Arkarachai, Fordham, Daniel, Costa, Vania, Mayes, Simon, Chiara, Matteo, Horner, David S., Myers, Eugene, Durbin, Richard, Achilli, Alessandro, Braun, Edward L., Phillippy, Adam M., Jarvis, Erich D.
Médium:	Journal Article
Jazyk:	angličtina
Vydáno:	London BioMed Central 29.04.2021 Springer Nature B.V BMC
Témata:	Accuracy Animal Genetics and Genomics Animals Assembly automation Bioinformatics Biomedical and Life Sciences Computational Biology - methods Computational Biology - standards Cytochrome Duplications Evolution, Molecular Evolutionary Biology Gene Duplication Genes Genome, Mitochondrial Genomes Genomics Genomics - methods High-Throughput Nucleotide Sequencing Human Genetics Life Sciences Long reads Microbial Genetics and Genomics Mitochondria Mitochondrial DNA mitochondrial genome nanopores Phylogenetics Plant Genetics and Genomics Repetitive Sequences, Nucleic Acid Sequencing species Success Taxonomy Vertebrate Vertebrates Vertebrates - genetics Duplications Long reads Vertebrate Mitochondrial DNA Repeats Sequencing Assembly
ISSN:	1474-760X, 1474-7596, 1474-760X
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