Structural basis for selectivity in a highly reducing type II polyketide synthase

In type II polyketide synthases (PKSs), the ketosynthase–chain length factor (KS–CLF) complex catalyzes polyketide chain elongation with the acyl carrier protein (ACP). Highly reducing type II PKSs, represented by IgaPKS, produce polyene structures instead of the well-known aromatic skeletons. Here,...

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Vydáno v:Nature chemical biology Ročník 16; číslo 7; s. 776 - 782
Hlavní autoři: Du, Danyao, Katsuyama, Yohei, Horiuchi, Masanobu, Fushinobu, Shinya, Chen, Aochiu, Davis, Tony D., Burkart, Michael D., Ohnishi, Yasuo
Médium: Journal Article
Jazyk:angličtina
Vydáno: New York Nature Publishing Group US 01.07.2020
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ISSN:1552-4450, 1552-4469, 1552-4469
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Abstract In type II polyketide synthases (PKSs), the ketosynthase–chain length factor (KS–CLF) complex catalyzes polyketide chain elongation with the acyl carrier protein (ACP). Highly reducing type II PKSs, represented by IgaPKS, produce polyene structures instead of the well-known aromatic skeletons. Here, we report the crystal structures of the Iga11–Iga12 (KS–CLF) heterodimer and the covalently cross-linked Iga10=Iga11–Iga12 (ACP=KS–CLF) tripartite complex. The latter structure revealed the molecular basis of the interaction between Iga10 and Iga11–Iga12, which differs from that between the ACP and KS of Escherichia coli fatty acid synthase. Furthermore, the reaction pocket structure and site-directed mutagenesis revealed that the negative charge of Asp 113 of Iga11 prevents further condensation using a β-ketoacyl product as a substrate, which distinguishes IgaPKS from typical type II PKSs. This work will facilitate the future rational design of PKSs. Structures of the ketosynthase–chain length factor complex from ishigamide biosynthesis, cross-linked to the acyl carrier protein, reveal the molecular interactions between these domains and how the reaction pocket limits rounds of product extension.
AbstractList In type II polyketide synthases (PKSs), the ketosynthase-chain length factor (KS-CLF) complex catalyzes polyketide chain elongation with the acyl carrier protein (ACP). Highly reducing type II PKSs, represented by IgaPKS, produce polyene structures instead of the well-known aromatic skeletons. Here, we report the crystal structures of the Iga11-Iga12 (KS-CLF) heterodimer and the covalently cross-linked Iga10=Iga11-Iga12 (ACP=KS-CLF) tripartite complex. The latter structure revealed the molecular basis of the interaction between Iga10 and Iga11-Iga12, which differs from that between the ACP and KS of Escherichia coli fatty acid synthase. Furthermore, the reaction pocket structure and site-directed mutagenesis revealed that the negative charge of Asp 113 of Iga11 prevents further condensation using a β-ketoacyl product as a substrate, which distinguishes IgaPKS from typical type II PKSs. This work will facilitate the future rational design of PKSs.
In type II polyketide synthases (PKSs), the ketosynthase–chain length factor (KS–CLF) complex catalyzes polyketide chain elongation with the acyl carrier protein (ACP). Highly reducing type II PKSs, represented by IgaPKS, produce polyene structures instead of the well-known aromatic skeletons. Here, we report the crystal structures of the Iga11–Iga12 (KS–CLF) heterodimer and the covalently cross-linked Iga10=Iga11–Iga12 (ACP=KS–CLF) tripartite complex. The latter structure revealed the molecular basis of the interaction between Iga10 and Iga11–Iga12, which differs from that between the ACP and KS of Escherichia coli fatty acid synthase. Furthermore, the reaction pocket structure and site-directed mutagenesis revealed that the negative charge of Asp 113 of Iga11 prevents further condensation using a β-ketoacyl product as a substrate, which distinguishes IgaPKS from typical type II PKSs. This work will facilitate the future rational design of PKSs.Structures of the ketosynthase–chain length factor complex from ishigamide biosynthesis, cross-linked to the acyl carrier protein, reveal the molecular interactions between these domains and how the reaction pocket limits rounds of product extension.
In type II polyketide synthases (PKSs), the ketosynthase-chain length factor (KS-CLF) complex catalyzes polyketide chain elongation with the acyl carrier protein (ACP). Highly reducing type II PKSs, represented by IgaPKS, produce polyene structures instead of the well-known aromatic skeletons. Here, we report the crystal structures of the Iga11-Iga12 (KS-CLF) heterodimer and the covalently cross-linked Iga10=Iga11-Iga12 (ACP=KS-CLF) tripartite complex. The latter structure revealed the molecular basis of the interaction between Iga10 and Iga11-Iga12, which differs from that between the ACP and KS of Escherichia coli fatty acid synthase. Furthermore, the reaction pocket structure and site-directed mutagenesis revealed that the negative charge of Asp 113 of Iga11 prevents further condensation using a β-ketoacyl product as a substrate, which distinguishes IgaPKS from typical type II PKSs. This work will facilitate the future rational design of PKSs.In type II polyketide synthases (PKSs), the ketosynthase-chain length factor (KS-CLF) complex catalyzes polyketide chain elongation with the acyl carrier protein (ACP). Highly reducing type II PKSs, represented by IgaPKS, produce polyene structures instead of the well-known aromatic skeletons. Here, we report the crystal structures of the Iga11-Iga12 (KS-CLF) heterodimer and the covalently cross-linked Iga10=Iga11-Iga12 (ACP=KS-CLF) tripartite complex. The latter structure revealed the molecular basis of the interaction between Iga10 and Iga11-Iga12, which differs from that between the ACP and KS of Escherichia coli fatty acid synthase. Furthermore, the reaction pocket structure and site-directed mutagenesis revealed that the negative charge of Asp 113 of Iga11 prevents further condensation using a β-ketoacyl product as a substrate, which distinguishes IgaPKS from typical type II PKSs. This work will facilitate the future rational design of PKSs.
In type II polyketide synthases (PKSs), the ketosynthase–chain length factor (KS–CLF) complex catalyzes polyketide chain elongation with the acyl carrier protein (ACP). Highly reducing type II PKSs, represented by IgaPKS, produce polyene structures instead of the well-known aromatic skeletons. Here, we report the crystal structures of the Iga11–Iga12 (KS–CLF) heterodimer and the covalently cross-linked Iga10=Iga11–Iga12 (ACP=KS–CLF) tripartite complex. The latter structure revealed the molecular basis of the interaction between Iga10 and Iga11–Iga12, which differs from that between the ACP and KS of Escherichia coli fatty acid synthase. Furthermore, the reaction pocket structure and site-directed mutagenesis revealed that the negative charge of Asp 113 of Iga11 prevents further condensation using a β-ketoacyl product as a substrate, which distinguishes IgaPKS from typical type II PKSs. This work will facilitate the future rational design of PKSs. Structures of the ketosynthase–chain length factor complex from ishigamide biosynthesis, cross-linked to the acyl carrier protein, reveal the molecular interactions between these domains and how the reaction pocket limits rounds of product extension.
Author Katsuyama, Yohei
Du, Danyao
Ohnishi, Yasuo
Horiuchi, Masanobu
Chen, Aochiu
Burkart, Michael D.
Davis, Tony D.
Fushinobu, Shinya
AuthorAffiliation 1 Department of Biotechnology, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, Japan
3 Department of Chemistry and Biochemistry, University of California, San Diego, San Diego, CA, USA
2 Collaborative Research Institute for Innovative Microbiology, The University of Tokyo, Tokyo, Japan
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BackLink https://www.ncbi.nlm.nih.gov/pubmed/32367018$$D View this record in MEDLINE/PubMed
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Cites_doi 10.1038/s41589-019-0301-y
10.1039/C8NP00030A
10.1039/C8NP00040A
10.1021/bi992121l
10.1074/jbc.M513199200
10.1021/jacs.8b10776
10.1021/ja5064857
10.1107/S0907444913000061
10.1107/S0907444904023510
10.1107/S0907444994003112
10.1039/B507395M
10.1002/cbic.201402578
10.1146/annurev-biochem-063011-164509
10.1038/nature12810
10.1002/cbic.200800198
10.1039/c2np20062g
10.1039/B512735A
10.1107/S0907444909047337
10.1107/S0907444909042589
10.1002/cbic.201600167
10.1021/jacs.8b04162
10.1038/s41589-018-0026-3
10.1038/nprot.2015.053
10.1107/S0907444909052925
10.1074/jbc.274.10.6031
10.1021/ja052911k
10.1073/pnas.1818686116
10.1107/S0907444910007493
10.1002/anie.201709636
10.1073/pnas.1520042113
10.1111/febs.12785
10.1002/anie.200806121
10.1038/nature04784
10.1016/j.bmcl.2008.01.026
10.1039/a909079g
10.1016/j.bmcl.2009.02.006
10.1038/srep14797
10.1021/ar8002249
10.1038/nsmb808
10.1021/cb6003965
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Author contributions
Y.K., M.D.B. and D.D. designed the research. T.D.D. synthesized the chemical probes. The crystallization of the proteins was done by D.D. The X-ray diffraction experiment was carried out by Y.K. and D.D. The experimental phasing was done by Y.K. Refinement and validation of the structure was done by D.D., Y.K. and S.F. Site-directed mutagenesis and analysis of mutants were done by D.D. and M.H. The cross-linked complex was prepared by D.D. and A.C. D.D. and Y.K. wrote the draft manuscript. A.C., T.D.D., M.D.B., S.F. and Y.O. commented on the draft. Y.K. and Y.O. finalized the manuscript and all authors approved it. Y.K., M.D.B. and Y.O. directed the research.
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References Moche, Schneider, Edwards, Dehesh, Lindqvist (CR17) 1999; 274
Worthington, Burkart (CR29) 2006; 4
Klaus, Grininger (CR1) 2018; 35
Nanson, Himiari, Swarbrick, Forwood (CR15) 2015; 5
Finzel, Lee, Burkart (CR18) 2015; 16
Crosby, Crump (CR19) 2012; 29
Miyanaga, Iwasawa, Shinohara, Kudo, Eguchi (CR22) 2016; 113
Hertweck (CR3) 2009; 48
Hertweck, Luzhetskyy, Rebets, Bechthold (CR4) 2007; 24
Du (CR8) 2016; 17
Evans, Murshudov (CR34) 2013; 69
Vagin (CR38) 2004; 60
Shen (CR12) 2009; 19
Staunton, Weissman (CR2) 2001; 18
Adams (CR39) 2010; 66
Chen, Re, Burkart (CR21) 2018; 35
Tsai (CR6) 2018; 87
Trajtenberg (CR13) 2014; 281
Keatinge-Clay, Maltby, Medzihradszky, Khosla, Stroud (CR11) 2004; 11
Wang (CR14) 2006; 441
Clarke, Mercer, La Clair, Burkart (CR30) 2005; 127
Miyanaga (CR23) 2018; 140
Vagin, Teplyakov (CR35) 2010; 66
Worthington, Rivera, Torpey, Alexander, Burkart (CR28) 2006; 1
Dodge (CR26) 2019; 116
(CR40) 1994; 50
Zhang, Hurlbert, White, Rock (CR16) 2006; 281
Kabsch (CR33) 2010; 66
Du, Katsuyama, Shin-Ya, Ohnishi (CR9) 2018; 57
Das, Khosla (CR5) 2009; 42
Shakya (CR20) 2014; 136
Herbst (CR27) 2018; 14
Dreier, Khosla (CR7) 2000; 39
Grammbitter (CR10) 2019; 141
Worthington (CR32) 2008; 9
Kelley, Mezulis, Yates, Wass, Sternberg (CR36) 2015; 10
Nguyen (CR24) 2014; 505
Milligan (CR25) 2019; 15
Haushalter, Worthington, Hur, Burkart (CR31) 2008; 18
Emsley, Lohkamp, Scott, Cowtan (CR37) 2010; 66
HC Shen (530_CR12) 2009; 19
A Miyanaga (530_CR23) 2018; 140
LA Kelley (530_CR36) 2015; 10
D Du (530_CR9) 2018; 57
JC Milligan (530_CR25) 2019; 15
S-C Tsai (530_CR6) 2018; 87
D Du (530_CR8) 2016; 17
C Hertweck (530_CR3) 2009; 48
Y-M Zhang (530_CR16) 2006; 281
J Staunton (530_CR2) 2001; 18
G Shakya (530_CR20) 2014; 136
AS Worthington (530_CR29) 2006; 4
C Hertweck (530_CR4) 2007; 24
J Dreier (530_CR7) 2000; 39
PR Evans (530_CR34) 2013; 69
P Emsley (530_CR37) 2010; 66
A Miyanaga (530_CR22) 2016; 113
K Finzel (530_CR18) 2015; 16
J Crosby (530_CR19) 2012; 29
W Kabsch (530_CR33) 2010; 66
GLC Grammbitter (530_CR10) 2019; 141
J Wang (530_CR14) 2006; 441
RW Haushalter (530_CR31) 2008; 18
A Das (530_CR5) 2009; 42
DA Herbst (530_CR27) 2018; 14
GJ Dodge (530_CR26) 2019; 116
AS Worthington (530_CR32) 2008; 9
AT Keatinge-Clay (530_CR11) 2004; 11
KM Clarke (530_CR30) 2005; 127
F Trajtenberg (530_CR13) 2014; 281
JD Nanson (530_CR15) 2015; 5
M Moche (530_CR17) 1999; 274
PD Adams (530_CR39) 2010; 66
M Klaus (530_CR1) 2018; 35
AS Worthington (530_CR28) 2006; 1
C Nguyen (530_CR24) 2014; 505
A Vagin (530_CR35) 2010; 66
A Chen (530_CR21) 2018; 35
AA Vagin (530_CR38) 2004; 60
Collaborative Computational Project, Number 4. (530_CR40) 1994; 50
References_xml – volume: 15
  start-page: 669
  year: 2019
  end-page: 671
  ident: CR25
  article-title: Molecular basis for interactions between an acyl carrier protein and a ketosynthase
  publication-title: Nat. Chem. Biol.
  doi: 10.1038/s41589-019-0301-y
– volume: 35
  start-page: 1070
  year: 2018
  end-page: 1081
  ident: CR1
  article-title: Engineering strategies for rational polyketide synthase design
  publication-title: Nat. Prod. Rep.
  doi: 10.1039/C8NP00030A
– volume: 35
  start-page: 1029
  year: 2018
  end-page: 1045
  ident: CR21
  article-title: Type II fatty acid and polyketide synthases: deciphering protein-protein and protein-substrate interactions
  publication-title: Nat. Prod. Rep.
  doi: 10.1039/C8NP00040A
– volume: 39
  start-page: 2088
  year: 2000
  end-page: 2095
  ident: CR7
  article-title: Mechanistic analysis of a type II polyketide synthase. Role of conserved residues in the β-ketoacyl synthase-chain length factor heterodimer
  publication-title: Biochemistry
  doi: 10.1021/bi992121l
– volume: 281
  start-page: 17390
  year: 2006
  end-page: 17399
  ident: CR16
  article-title: Roles of the active site water, histidine 303, and phenylalanine 396 in the catalytic mechanism of the elongation condensing enzyme of
  publication-title: J. Biol. Chem.
  doi: 10.1074/jbc.M513199200
– volume: 141
  start-page: 16615
  year: 2019
  end-page: 16623
  ident: CR10
  article-title: An uncommon type II PKS catalyzes biosynthesis of aryl polyene pigments
  publication-title: J. Am. Chem. Soc.
  doi: 10.1021/jacs.8b10776
– volume: 136
  start-page: 16792
  year: 2014
  end-page: 16799
  ident: CR20
  article-title: Modeling linear and cyclic PKS intermediates through atom replacement
  publication-title: J. Am. Chem. Soc.
  doi: 10.1021/ja5064857
– volume: 69
  start-page: 1204
  year: 2013
  end-page: 1214
  ident: CR34
  article-title: How good are my data and what is the resolution?
  publication-title: Acta Crystallogr. D Biol. Crystallogr.
  doi: 10.1107/S0907444913000061
– volume: 60
  start-page: 2184
  year: 2004
  end-page: 2195
  ident: CR38
  article-title: REFMAC5 dictionary: organization of prior chemical knowledge and guidelines for its use
  publication-title: Acta Crystallogr. D Biol. Crystallogr.
  doi: 10.1107/S0907444904023510
– volume: 50
  start-page: 760
  year: 1994
  end-page: 763
  ident: CR40
  article-title: The CCP4 suite: programs for protein crystallography
  publication-title: Acta Crystallogr. D Biol. Crystallogr.
  doi: 10.1107/S0907444994003112
– volume: 24
  start-page: 162
  year: 2007
  end-page: 190
  ident: CR4
  article-title: Type II polyketide synthases: gaining a deeper insight into enzymatic teamwork
  publication-title: Nat. Prod. Rep.
  doi: 10.1039/B507395M
– volume: 16
  start-page: 528
  year: 2015
  end-page: 547
  ident: CR18
  article-title: Using modern tools to probe the structure-function relationship of fatty acid synthases
  publication-title: Chembiochem
  doi: 10.1002/cbic.201402578
– volume: 87
  start-page: 503
  year: 2018
  end-page: 531
  ident: CR6
  article-title: The structural enzymology of iterative aromatic polyketide synthases: a critical comparison with fatty acid synthases
  publication-title: Annu. Rev. Biochem.
  doi: 10.1146/annurev-biochem-063011-164509
– volume: 505
  start-page: 427
  year: 2014
  end-page: 431
  ident: CR24
  article-title: Trapping the dynamic acyl carrier protein in fatty acid biosynthesis
  publication-title: Nature
  doi: 10.1038/nature12810
– volume: 9
  start-page: 2096
  year: 2008
  end-page: 2103
  ident: CR32
  article-title: Probing the compatibility of type II ketosynthase-carrier protein partners
  publication-title: Chembiochem
  doi: 10.1002/cbic.200800198
– volume: 29
  start-page: 1111
  year: 2012
  end-page: 1137
  ident: CR19
  article-title: The structural role of the carrier protein–active controller or passive carrier
  publication-title: Nat. Prod. Rep.
  doi: 10.1039/c2np20062g
– volume: 4
  start-page: 44
  year: 2006
  end-page: 46
  ident: CR29
  article-title: One-pot chemo-enzymatic synthesis of reporter-modified proteins
  publication-title: Org. Biomol. Chem.
  doi: 10.1039/B512735A
– volume: 66
  start-page: 125
  year: 2010
  end-page: 132
  ident: CR33
  article-title: XDS
  publication-title: Acta Crystallogr. D Biol. Crystallogr.
  doi: 10.1107/S0907444909047337
– volume: 66
  start-page: 22
  year: 2010
  end-page: 25
  ident: CR35
  article-title: Molecular replacement with MOLREP
  publication-title: Acta Crystallogr. D Biol. Crystallogr.
  doi: 10.1107/S0907444909042589
– volume: 17
  start-page: 1464
  year: 2016
  end-page: 1471
  ident: CR8
  article-title: Production of a novel amide-containing polyene by activating a cryptic biosynthetic gene cluster in sp. MSC090213JE08
  publication-title: ChemBioChem
  doi: 10.1002/cbic.201600167
– volume: 140
  start-page: 7970
  year: 2018
  end-page: 7978
  ident: CR23
  article-title: Structural basis of protein-protein interactions between a trans-acting acyltransferase and acyl carrier protein in polyketide disorazole biosynthesis
  publication-title: J. Am. Chem. Soc.
  doi: 10.1021/jacs.8b04162
– volume: 14
  start-page: 474
  year: 2018
  end-page: 479
  ident: CR27
  article-title: The structural organization of substrate loading in iterative polyketide synthases
  publication-title: Nat. Chem. Biol.
  doi: 10.1038/s41589-018-0026-3
– volume: 10
  start-page: 845
  year: 2015
  end-page: 858
  ident: CR36
  article-title: The Phyre2 web portal for protein modeling, prediction and analysis
  publication-title: Nat. Protoc.
  doi: 10.1038/nprot.2015.053
– volume: 66
  start-page: 213
  year: 2010
  end-page: 221
  ident: CR39
  article-title: PHENIX: a comprehensive Python-based system for macromolecular structure solution
  publication-title: Acta Crystallogr. D Biol. Crystallogr.
  doi: 10.1107/S0907444909052925
– volume: 274
  start-page: 6031
  year: 1999
  end-page: 6034
  ident: CR17
  article-title: Structure of the complex between the antibiotic cerulenin and its target, β-ketoacyl-acyl carrier protein synthase
  publication-title: J. Biol. Chem.
  doi: 10.1074/jbc.274.10.6031
– volume: 127
  start-page: 11234
  year: 2005
  end-page: 11235
  ident: CR30
  article-title: In vivo reporter labeling of proteins via metabolic delivery of coenzyme A analogues
  publication-title: J. Am. Chem. Soc.
  doi: 10.1021/ja052911k
– volume: 116
  start-page: 6775
  year: 2019
  end-page: 6783
  ident: CR26
  article-title: Structural and dynamical rationale for fatty acid unsaturation in
  publication-title: Proc. Natl Acad. Sci. USA
  doi: 10.1073/pnas.1818686116
– volume: 66
  start-page: 486
  year: 2010
  end-page: 501
  ident: CR37
  article-title: Features and development of Coot
  publication-title: Acta Crystallogr. D Biol. Crystallogr.
  doi: 10.1107/S0907444910007493
– volume: 57
  start-page: 1954
  year: 2018
  end-page: 1957
  ident: CR9
  article-title: Reconstitution of a type II polyketide synthase that catalyzes polyene formation
  publication-title: Angew. Chem. Int. Ed. Engl.
  doi: 10.1002/anie.201709636
– volume: 113
  start-page: 1802
  year: 2016
  end-page: 1807
  ident: CR22
  article-title: Structure-based analysis of the molecular interactions between acyltransferase and acyl carrier protein in vicenistatin biosynthesis
  publication-title: Proc. Natl Acad. Sci. USA
  doi: 10.1073/pnas.1520042113
– volume: 281
  start-page: 2324
  year: 2014
  end-page: 2338
  ident: CR13
  article-title: Structural insights into bacterial resistance to cerulenin
  publication-title: FEBS J.
  doi: 10.1111/febs.12785
– volume: 48
  start-page: 4688
  year: 2009
  end-page: 4716
  ident: CR3
  article-title: The biosynthetic logic of polyketide diversity
  publication-title: Angew. Chem. Int. Ed. Engl.
  doi: 10.1002/anie.200806121
– volume: 441
  start-page: 358
  year: 2006
  end-page: 361
  ident: CR14
  article-title: Platensimycin is a selective FabF inhibitor with potent antibiotic properties
  publication-title: Nature
  doi: 10.1038/nature04784
– volume: 18
  start-page: 3039
  year: 2008
  end-page: 3042
  ident: CR31
  article-title: An orthogonal purification strategy for isolating crosslinked domains of modular synthases
  publication-title: Bioorg. Med. Chem. Lett.
  doi: 10.1016/j.bmcl.2008.01.026
– volume: 18
  start-page: 380
  year: 2001
  end-page: 416
  ident: CR2
  article-title: Polyketide biosynthesis: a millennium review
  publication-title: Nat. Prod. Rep.
  doi: 10.1039/a909079g
– volume: 19
  start-page: 1623
  year: 2009
  end-page: 1627
  ident: CR12
  article-title: Synthesis and biological evaluation of platensimycin analogs
  publication-title: Bioorg. Med. Chem. Lett.
  doi: 10.1016/j.bmcl.2009.02.006
– volume: 5
  year: 2015
  ident: CR15
  article-title: Structural characterisation of the beta-ketoacyl-acyl carrier protein synthases, FabF and FabH, of
  publication-title: Sci. Rep.
  doi: 10.1038/srep14797
– volume: 42
  start-page: 631
  year: 2009
  end-page: 639
  ident: CR5
  article-title: Biosynthesis of aromatic polyketides in bacteria
  publication-title: Acc. Chem. Res.
  doi: 10.1021/ar8002249
– volume: 11
  start-page: 888
  year: 2004
  end-page: 893
  ident: CR11
  article-title: An antibiotic factory caught in action
  publication-title: Nat. Struct. Mol. Biol.
  doi: 10.1038/nsmb808
– volume: 1
  start-page: 687
  year: 2006
  end-page: 691
  ident: CR28
  article-title: Mechanism-based protein cross-linking probes to investigate carrier protein-mediated biosynthesis
  publication-title: ACS Chem. Biol.
  doi: 10.1021/cb6003965
– volume: 66
  start-page: 125
  year: 2010
  ident: 530_CR33
  publication-title: Acta Crystallogr. D Biol. Crystallogr.
  doi: 10.1107/S0907444909047337
– volume: 5
  year: 2015
  ident: 530_CR15
  publication-title: Sci. Rep.
  doi: 10.1038/srep14797
– volume: 113
  start-page: 1802
  year: 2016
  ident: 530_CR22
  publication-title: Proc. Natl Acad. Sci. USA
  doi: 10.1073/pnas.1520042113
– volume: 42
  start-page: 631
  year: 2009
  ident: 530_CR5
  publication-title: Acc. Chem. Res.
  doi: 10.1021/ar8002249
– volume: 60
  start-page: 2184
  year: 2004
  ident: 530_CR38
  publication-title: Acta Crystallogr. D Biol. Crystallogr.
  doi: 10.1107/S0907444904023510
– volume: 11
  start-page: 888
  year: 2004
  ident: 530_CR11
  publication-title: Nat. Struct. Mol. Biol.
  doi: 10.1038/nsmb808
– volume: 66
  start-page: 486
  year: 2010
  ident: 530_CR37
  publication-title: Acta Crystallogr. D Biol. Crystallogr.
  doi: 10.1107/S0907444910007493
– volume: 24
  start-page: 162
  year: 2007
  ident: 530_CR4
  publication-title: Nat. Prod. Rep.
  doi: 10.1039/B507395M
– volume: 141
  start-page: 16615
  year: 2019
  ident: 530_CR10
  publication-title: J. Am. Chem. Soc.
  doi: 10.1021/jacs.8b10776
– volume: 35
  start-page: 1029
  year: 2018
  ident: 530_CR21
  publication-title: Nat. Prod. Rep.
  doi: 10.1039/C8NP00040A
– volume: 66
  start-page: 213
  year: 2010
  ident: 530_CR39
  publication-title: Acta Crystallogr. D Biol. Crystallogr.
  doi: 10.1107/S0907444909052925
– volume: 441
  start-page: 358
  year: 2006
  ident: 530_CR14
  publication-title: Nature
  doi: 10.1038/nature04784
– volume: 10
  start-page: 845
  year: 2015
  ident: 530_CR36
  publication-title: Nat. Protoc.
  doi: 10.1038/nprot.2015.053
– volume: 281
  start-page: 17390
  year: 2006
  ident: 530_CR16
  publication-title: J. Biol. Chem.
  doi: 10.1074/jbc.M513199200
– volume: 127
  start-page: 11234
  year: 2005
  ident: 530_CR30
  publication-title: J. Am. Chem. Soc.
  doi: 10.1021/ja052911k
– volume: 16
  start-page: 528
  year: 2015
  ident: 530_CR18
  publication-title: Chembiochem
  doi: 10.1002/cbic.201402578
– volume: 48
  start-page: 4688
  year: 2009
  ident: 530_CR3
  publication-title: Angew. Chem. Int. Ed. Engl.
  doi: 10.1002/anie.200806121
– volume: 4
  start-page: 44
  year: 2006
  ident: 530_CR29
  publication-title: Org. Biomol. Chem.
  doi: 10.1039/B512735A
– volume: 87
  start-page: 503
  year: 2018
  ident: 530_CR6
  publication-title: Annu. Rev. Biochem.
  doi: 10.1146/annurev-biochem-063011-164509
– volume: 69
  start-page: 1204
  year: 2013
  ident: 530_CR34
  publication-title: Acta Crystallogr. D Biol. Crystallogr.
  doi: 10.1107/S0907444913000061
– volume: 57
  start-page: 1954
  year: 2018
  ident: 530_CR9
  publication-title: Angew. Chem. Int. Ed. Engl.
  doi: 10.1002/anie.201709636
– volume: 29
  start-page: 1111
  year: 2012
  ident: 530_CR19
  publication-title: Nat. Prod. Rep.
  doi: 10.1039/c2np20062g
– volume: 14
  start-page: 474
  year: 2018
  ident: 530_CR27
  publication-title: Nat. Chem. Biol.
  doi: 10.1038/s41589-018-0026-3
– volume: 9
  start-page: 2096
  year: 2008
  ident: 530_CR32
  publication-title: Chembiochem
  doi: 10.1002/cbic.200800198
– volume: 1
  start-page: 687
  year: 2006
  ident: 530_CR28
  publication-title: ACS Chem. Biol.
  doi: 10.1021/cb6003965
– volume: 39
  start-page: 2088
  year: 2000
  ident: 530_CR7
  publication-title: Biochemistry
  doi: 10.1021/bi992121l
– volume: 116
  start-page: 6775
  year: 2019
  ident: 530_CR26
  publication-title: Proc. Natl Acad. Sci. USA
  doi: 10.1073/pnas.1818686116
– volume: 505
  start-page: 427
  year: 2014
  ident: 530_CR24
  publication-title: Nature
  doi: 10.1038/nature12810
– volume: 281
  start-page: 2324
  year: 2014
  ident: 530_CR13
  publication-title: FEBS J.
  doi: 10.1111/febs.12785
– volume: 136
  start-page: 16792
  year: 2014
  ident: 530_CR20
  publication-title: J. Am. Chem. Soc.
  doi: 10.1021/ja5064857
– volume: 18
  start-page: 3039
  year: 2008
  ident: 530_CR31
  publication-title: Bioorg. Med. Chem. Lett.
  doi: 10.1016/j.bmcl.2008.01.026
– volume: 17
  start-page: 1464
  year: 2016
  ident: 530_CR8
  publication-title: ChemBioChem
  doi: 10.1002/cbic.201600167
– volume: 15
  start-page: 669
  year: 2019
  ident: 530_CR25
  publication-title: Nat. Chem. Biol.
  doi: 10.1038/s41589-019-0301-y
– volume: 50
  start-page: 760
  year: 1994
  ident: 530_CR40
  publication-title: Acta Crystallogr. D Biol. Crystallogr.
  doi: 10.1107/S0907444994003112
– volume: 19
  start-page: 1623
  year: 2009
  ident: 530_CR12
  publication-title: Bioorg. Med. Chem. Lett.
  doi: 10.1016/j.bmcl.2009.02.006
– volume: 18
  start-page: 380
  year: 2001
  ident: 530_CR2
  publication-title: Nat. Prod. Rep.
  doi: 10.1039/a909079g
– volume: 66
  start-page: 22
  year: 2010
  ident: 530_CR35
  publication-title: Acta Crystallogr. D Biol. Crystallogr.
  doi: 10.1107/S0907444909042589
– volume: 35
  start-page: 1070
  year: 2018
  ident: 530_CR1
  publication-title: Nat. Prod. Rep.
  doi: 10.1039/C8NP00030A
– volume: 140
  start-page: 7970
  year: 2018
  ident: 530_CR23
  publication-title: J. Am. Chem. Soc.
  doi: 10.1021/jacs.8b04162
– volume: 274
  start-page: 6031
  year: 1999
  ident: 530_CR17
  publication-title: J. Biol. Chem.
  doi: 10.1074/jbc.274.10.6031
SSID ssj0036618
Score 2.5004132
Snippet In type II polyketide synthases (PKSs), the ketosynthase–chain length factor (KS–CLF) complex catalyzes polyketide chain elongation with the acyl carrier...
In type II polyketide synthases (PKSs), the ketosynthase-chain length factor (KS-CLF) complex catalyzes polyketide chain elongation with the acyl carrier...
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pubmed
crossref
springer
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StartPage 776
SubjectTerms 631/535/1266
631/92/60
631/92/607
Acyl carrier protein
Acyl Carrier Protein - chemistry
Acyl Carrier Protein - genetics
Acyl Carrier Protein - metabolism
Antifungal agents
Biocatalysis
Biochemical Engineering
Biochemistry
Bioorganic Chemistry
Biosynthesis
Catalytic Domain
Cell Biology
Chemistry
Chemistry and Materials Science
Chemistry/Food Science
Cloning, Molecular
Condensates
Condensation
Crosslinking
Crystal structure
Crystallography, X-Ray
E coli
Elongation
Escherichia coli - enzymology
Escherichia coli - genetics
Escherichia coli Proteins - chemistry
Escherichia coli Proteins - genetics
Escherichia coli Proteins - metabolism
Fatty Acid Synthases - chemistry
Fatty Acid Synthases - genetics
Fatty Acid Synthases - metabolism
Fatty acids
Fatty-acid synthase
Gene Expression
Genetic Vectors - chemistry
Genetic Vectors - metabolism
Models, Molecular
Molecular interactions
Molecular structure
Mutagenesis
Mutagenesis, Site-Directed
Polyketide synthase
Polyketide Synthases - chemistry
Polyketide Synthases - genetics
Polyketide Synthases - metabolism
Polyketides - chemistry
Polyketides - metabolism
Protein Binding
Protein Conformation, alpha-Helical
Protein Conformation, beta-Strand
Protein Interaction Domains and Motifs
Protein Multimerization
Proteins
Recombinant Proteins - chemistry
Recombinant Proteins - genetics
Recombinant Proteins - metabolism
Selectivity
Site-directed mutagenesis
Streptomyces - enzymology
Streptomyces - genetics
Substrate Specificity
Substrates
Title Structural basis for selectivity in a highly reducing type II polyketide synthase
URI https://link.springer.com/article/10.1038/s41589-020-0530-0
https://www.ncbi.nlm.nih.gov/pubmed/32367018
https://www.proquest.com/docview/2415570255
https://www.proquest.com/docview/2476776216
https://www.proquest.com/docview/2398622104
https://pubmed.ncbi.nlm.nih.gov/PMC7556716
Volume 16
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