Database searching and accounting of multiplexed precursor and product ion spectra from the data independent analysis of simple and complex peptide mixtures

A novel database search algorithm is presented for the qualitative identification of proteins over a wide dynamic range, both in simple and complex biological samples. The algorithm has been designed for the analysis of data originating from data independent acquisitions, whereby multiple precursor...

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Vydané v:	Proteomics (Weinheim) Ročník 9; číslo 6; s. 1696 - 1719
Hlavní autori:	Li, Guo-Zhong, Vissers, Johannes P.C, Silva, Jeffrey C, Golick, Dan, Gorenstein, Marc V, Geromanos, Scott J
Médium:	Journal Article
Jazyk:	English
Vydavateľské údaje:	Weinheim Wiley-VCH Verlag 01.03.2009 WILEY‐VCH Verlag Wiley-VCH
Predmet:	Algorithms Amino Acid Sequence Analytical, structural and metabolic biochemistry Biological and medical sciences Complex Mixtures - analysis Data independent LC‐MS Database searching Databases, Protein Fundamental and applied biological sciences. Psychology Miscellaneous Molecular Sequence Data Molecular Weight Multiplexed LC‐MS Parallel LC‐MS Peptides - analysis Protein Processing, Post-Translational Proteins Proteins - chemistry Proteome - analysis ROC Curve Shotgun sequencing Time Factors Parallel LC-MS Data analysis Multiplexed LC-MS Peptides Data independent LC-MS Proteomics Database Database searching Sequencing Shotgun sequencing
ISSN:	1615-9853, 1615-9861, 1615-9861
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