PyBioNetFit and the Biological Property Specification Language

In systems biology modeling, important steps include model parameterization, uncertainty quantification, and evaluation of agreement with experimental observations. To help modelers perform these steps, we developed the software PyBioNetFit, which in addition supports checking models against known s...

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Bibliographic Details
Published in:	iScience Vol. 19; no. C; pp. 1012 - 1036
Main Authors:	Mitra, Eshan D., Suderman, Ryan, Colvin, Joshua, Ionkov, Alexander, Hu, Andrew, Sauro, Herbert M., Posner, Richard G., Hlavacek, William S.
Format:	Journal Article
Language:	English
Published:	United States Elsevier Inc 27.09.2019 Elsevier
Subjects:	BASIC BIOLOGICAL SCIENCES Bioinformatics Biological Sciences Bootstrapping Categorical data Complex Systems Computer Science Curve fitting Markov chain Monte Carlo MATHEMATICS AND COMPUTING Parallel computing Parallel System Parameter identification Rule-based modeling Systems Biology Biological Sciences Parallel System Bioinformatics Systems Biology Complex Systems Computer Science
ISSN:	2589-0042, 2589-0042
Online Access:	Get full text
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