ClustalW-MPI: ClustalW analysis using distributed and parallel computing

ClustalW is a tool for aligning multiple protein or nucleotide sequences. The alignment is achieved via three steps: pairwise alignment, guide-tree generation and progressive alignment. ClustalW-MPI is a distributed and parallel implementation of ClustalW. All three steps have been parallelized to r...

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Bibliographic Details
Published in:	Bioinformatics Vol. 19; no. 12; pp. 1585 - 1586
Main Author:	Li, Kuo-Bin
Format:	Journal Article
Language:	English
Published:	Oxford Oxford University Press 12.08.2003 Oxford Publishing Limited (England)
Subjects:	Amino Acid Sequence Base Sequence Biological and medical sciences Cluster Analysis Computing Methodologies Fundamental and applied biological sciences. Psychology Gene Expression Profiling - methods General aspects Mathematics in biology. Statistical analysis. Models. Metrology. Data processing in biology (general aspects) Molecular Sequence Data Sequence Alignment - methods Sequence Analysis, DNA - methods Sequence Analysis, Protein - methods Sequence Homology, Amino Acid Sequence Homology, Nucleic Acid Software Computer program Web site Bioinformatics Phylogenetic tree Sequence alignment Execution time
ISSN:	1367-4803, 1460-2059, 1367-4811
Online Access:	Get full text
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