IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies

Large phylogenomics data sets require fast tree inference methods, especially for maximum-likelihood (ML) phylogenies. Fast programs exist, but due to inherent heuristics to find optimal trees, it is not clear whether the best tree is found. Thus, there is need for additional approaches that employ...

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Bibliographic Details
Published in:	Molecular biology and evolution Vol. 32; no. 1; pp. 268 - 274
Main Authors:	Nguyen, Lam-Tung, Schmidt, Heiko A., von Haeseler, Arndt, Minh, Bui Quang
Format:	Journal Article
Language:	English
Published:	United States Oxford University Press 01.01.2015
Subjects:	Algorithms Computational Biology - methods Genome Genomics Heuristic Intelligence Likelihood Functions Maximum likelihood method Methods Perturbation methods Phylogenetics Phylogeny Proteins Sequence Analysis, DNA Software Stochastic models Time Factors Trees phylogeny phylogenetic inference stochastic algorithm maximum likelihood
ISSN:	0737-4038, 1537-1719, 1537-1719
Online Access:	Get full text
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