A Roadmap for Genome-Based Phage Taxonomy

Bacteriophage (phage) taxonomy has been in flux since its inception over four decades ago. Genome sequencing has put pressure on the classification system and recent years have seen significant changes to phage taxonomy. Here, we reflect on the state of phage taxonomy and provide a roadmap for the f...

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Vydáno v:Viruses Ročník 13; číslo 3; s. 506
Hlavní autoři: Turner, Dann, Kropinski, Andrew M., Adriaenssens, Evelien M.
Médium: Journal Article
Jazyk:angličtina
Vydáno: Switzerland MDPI 18.03.2021
MDPI AG
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ISSN:1999-4915, 1999-4915
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Abstract Bacteriophage (phage) taxonomy has been in flux since its inception over four decades ago. Genome sequencing has put pressure on the classification system and recent years have seen significant changes to phage taxonomy. Here, we reflect on the state of phage taxonomy and provide a roadmap for the future, including the abolition of the order Caudovirales and the families Myoviridae, Podoviridae, and Siphoviridae. Furthermore, we specify guidelines for the demarcation of species, genus, subfamily and family-level ranks of tailed phage taxonomy.
AbstractList Bacteriophage (phage) taxonomy has been in flux since its inception over four decades ago. Genome sequencing has put pressure on the classification system and recent years have seen significant changes to phage taxonomy. Here, we reflect on the state of phage taxonomy and provide a roadmap for the future, including the abolition of the order Caudovirales and the families Myoviridae, Podoviridae, and Siphoviridae. Furthermore, we specify guidelines for the demarcation of species, genus, subfamily and family-level ranks of tailed phage taxonomy.
Bacteriophage (phage) taxonomy has been in flux since its inception over four decades ago. Genome sequencing has put pressure on the classification system and recent years have seen significant changes to phage taxonomy. Here, we reflect on the state of phage taxonomy and provide a roadmap for the future, including the abolition of the order and the families , and . Furthermore, we specify guidelines for the demarcation of species, genus, subfamily and family-level ranks of tailed phage taxonomy.
Bacteriophage (phage) taxonomy has been in flux since its inception over four decades ago. Genome sequencing has put pressure on the classification system and recent years have seen significant changes to phage taxonomy. Here, we reflect on the state of phage taxonomy and provide a roadmap for the future, including the abolition of the order Caudovirales and the families Myoviridae, Podoviridae, and Siphoviridae. Furthermore, we specify guidelines for the demarcation of species, genus, subfamily and family-level ranks of tailed phage taxonomy.Bacteriophage (phage) taxonomy has been in flux since its inception over four decades ago. Genome sequencing has put pressure on the classification system and recent years have seen significant changes to phage taxonomy. Here, we reflect on the state of phage taxonomy and provide a roadmap for the future, including the abolition of the order Caudovirales and the families Myoviridae, Podoviridae, and Siphoviridae. Furthermore, we specify guidelines for the demarcation of species, genus, subfamily and family-level ranks of tailed phage taxonomy.
Author Kropinski, Andrew M.
Adriaenssens, Evelien M.
Turner, Dann
AuthorAffiliation 3 Department of Pathobiology, University of Guelph, Guelph, ON N1G 2W1, Canada
4 Quadram Institute Bioscience, Norwich Research Park, Norwich NR4 7UQ, UK
1 Department of Applied Sciences, University of the West of England, Bristol BS16 1QY, UK; dann2.turner@uwe.ac.uk
2 Department of Food Science, University of Guelph, Guelph, ON N1G 2W1, Canada; phage.canada@gmail.com
AuthorAffiliation_xml – name: 2 Department of Food Science, University of Guelph, Guelph, ON N1G 2W1, Canada; phage.canada@gmail.com
– name: 4 Quadram Institute Bioscience, Norwich Research Park, Norwich NR4 7UQ, UK
– name: 1 Department of Applied Sciences, University of the West of England, Bristol BS16 1QY, UK; dann2.turner@uwe.ac.uk
– name: 3 Department of Pathobiology, University of Guelph, Guelph, ON N1G 2W1, Canada
Author_xml – sequence: 1
  givenname: Dann
  orcidid: 0000-0002-0249-4513
  surname: Turner
  fullname: Turner, Dann
– sequence: 2
  givenname: Andrew M.
  orcidid: 0000-0002-6871-6799
  surname: Kropinski
  fullname: Kropinski, Andrew M.
– sequence: 3
  givenname: Evelien M.
  orcidid: 0000-0003-4826-5406
  surname: Adriaenssens
  fullname: Adriaenssens, Evelien M.
BackLink https://www.ncbi.nlm.nih.gov/pubmed/33803862$$D View this record in MEDLINE/PubMed
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Cites_doi 10.1128/br.31.4.230-314.1967
10.1073/pnas.1703834114
10.3389/fmicb.2015.00375
10.1186/s12864-016-3286-x
10.1128/MMBR.00061-19
10.1038/nature25474
10.1186/s40168-018-0422-7
10.1038/s41586-020-2007-4
10.1093/molbev/msn023
10.1101/2020.07.05.188268
10.1093/gigascience/giz119
10.1016/j.virol.2014.10.016
10.1128/mBio.00978-16
10.1186/s13059-016-0997-x
10.1093/nar/gkr948
10.1007/s007050170120
10.1038/nbt.4306
10.1038/ncomms5498
10.1007/s00705-015-2728-0
10.1093/nar/gkr1065
10.1093/bioinformatics/btv421
10.1038/nmeth.4285
10.1016/j.resmic.2008.03.005
10.1038/s41564-018-0338-9
10.1093/bioinformatics/bts565
10.1099/jgv.0.001488
10.1038/s41598-019-47742-z
10.1016/j.chom.2018.10.002
10.1371/journal.pone.0040418
10.3390/antibiotics9100663
10.1016/j.chom.2020.08.003
10.1093/nar/gkr367
10.1201/9780203491751
10.1128/JB.184.16.4529-4535.2002
10.7717/peerj.3243
10.1093/nar/gki408
10.1093/nar/gkn845
10.1038/s41587-019-0100-8
10.1007/s00705-018-3723-z
10.1128/AEM.02411-13
10.1186/1471-2105-12-124
10.1038/s41564-020-0709-x
10.1126/sciadv.aay5981
10.1093/molbev/msu300
10.1186/1756-0500-6-140
10.1099/jgv.0.001110
10.1099/jgv.0.001392
10.1038/s41564-019-0510-x
10.1093/sysbio/syz036
10.1016/S0022-2836(05)80360-2
10.1093/nar/gkn180
10.1093/nar/gkz239
10.1093/oso/9780195168778.001.0001
10.1159/000149758
10.1186/1471-2180-9-224
10.1093/bioinformatics/btx157
10.1093/molbev/msx281
10.1371/journal.pone.0019893
10.1038/s41564-019-0494-6
10.1371/journal.pbio.1002409
10.1007/s00705-020-04577-8
10.1038/s41564-019-0448-z
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Issue 3
Keywords Caudovirales
phage taxonomy
Podoviridae
Siphoviridae
phage classification
Myoviridae
demarcation criteria
Language English
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References Devoto (ref_30) 2019; 4
Edwards (ref_29) 2019; 4
Punta (ref_57) 2012; 40
Barylski (ref_23) 2020; 101
Guerin (ref_28) 2018; 24
Iranzo (ref_13) 2016; 7
Roux (ref_32) 2019; 4
Laanto (ref_25) 2017; 114
Kalyaanamoorthy (ref_61) 2017; 14
Hunter (ref_58) 2012; 40
ref_52
Bolduc (ref_14) 2017; 5
Rohwer (ref_10) 2002; 184
Koonin (ref_39) 2020; 84
Laanto (ref_26) 2020; 101
Page (ref_51) 2015; 31
Reyes (ref_18) 2019; 9
Jang (ref_15) 2019; 37
Adriaenssens (ref_21) 2020; 165
Finn (ref_56) 2011; 39
Dutilh (ref_27) 2014; 5
Aiewsakun (ref_16) 2018; 6
Fu (ref_45) 2012; 28
Bayliss (ref_53) 2019; 8
Lavigne (ref_7) 2008; 159
Aiewsakun (ref_17) 2018; 99
Gregory (ref_49) 2020; 28
Callanan (ref_37) 2020; 6
Ackermann (ref_5) 1974; 3
Turner (ref_41) 2013; 6
Letunic (ref_42) 2019; 47
Ackermann (ref_2) 2001; 146
Nishimura (ref_11) 2017; 33
ref_36
Hoang (ref_62) 2018; 35
ref_34
ref_33
Toussaint (ref_12) 2008; 25
Krupovic (ref_9) 2016; 161
Anderson (ref_59) 2009; 37
Barylski (ref_22) 2020; 69
Sachdeva (ref_31) 2020; 578
Nguyen (ref_60) 2015; 32
Altschul (ref_43) 1990; 215
Gorbalenya (ref_38) 2020; 5
Adriaenssens (ref_20) 2018; 163
Low (ref_19) 2019; 4
Vinuesa (ref_54) 2013; 79
Kauffman (ref_24) 2018; 554
ref_47
Roux (ref_48) 2019; 37
ref_44
Adriaenssens (ref_46) 2015; 477
ref_40
ref_1
ref_3
Quaiser (ref_35) 2015; 6
Bradley (ref_4) 1967; 31
Biegert (ref_55) 2005; 33
Ondov (ref_50) 2016; 17
Dereeper (ref_63) 2008; 36
ref_8
ref_6
References_xml – volume: 31
  start-page: 230
  year: 1967
  ident: ref_4
  article-title: Ultrastructure of bacteriophage and bacteriocins
  publication-title: Bacteriol. Rev.
  doi: 10.1128/br.31.4.230-314.1967
– volume: 114
  start-page: 8378
  year: 2017
  ident: ref_25
  article-title: Virus found in a boreal lake links ssDNA and dsDNA viruses
  publication-title: Proc. Natl. Acad. Sci. USA
  doi: 10.1073/pnas.1703834114
– volume: 6
  start-page: 375
  year: 2015
  ident: ref_35
  article-title: Diversity and comparative genomics of Microviridae in Sphagnum- dominated peatlands
  publication-title: Front. Microbiol.
  doi: 10.3389/fmicb.2015.00375
– ident: ref_47
  doi: 10.1186/s12864-016-3286-x
– volume: 84
  start-page: e00061-19
  year: 2020
  ident: ref_39
  article-title: Global Organization and Proposed Megataxonomy of the Virus World
  publication-title: Microbiol. Mol. Biol. Rev.
  doi: 10.1128/MMBR.00061-19
– volume: 554
  start-page: 118
  year: 2018
  ident: ref_24
  article-title: A major lineage of non-tailed dsDNA viruses as unrecognized killers of marine bacteria
  publication-title: Nature
  doi: 10.1038/nature25474
– volume: 6
  start-page: 38
  year: 2018
  ident: ref_16
  article-title: The genomic underpinnings of eukaryotic virus taxonomy: Creating a sequence-based framework for family-level virus classification
  publication-title: Microbiome
  doi: 10.1186/s40168-018-0422-7
– volume: 578
  start-page: 425
  year: 2020
  ident: ref_31
  article-title: Clades of huge phages from across Earth’s ecosystems
  publication-title: Nature
  doi: 10.1038/s41586-020-2007-4
– volume: 25
  start-page: 762
  year: 2008
  ident: ref_12
  article-title: Reticulate representation of evolutionary and functional relationships between phage genomes
  publication-title: Mol. Biol. Evol.
  doi: 10.1093/molbev/msn023
– ident: ref_44
  doi: 10.1101/2020.07.05.188268
– volume: 8
  start-page: 1
  year: 2019
  ident: ref_53
  article-title: PIRATE: A fast and scalable pangenomics toolbox for clustering diverged orthologues in bacteria
  publication-title: Gigascience
  doi: 10.1093/gigascience/giz119
– volume: 477
  start-page: 144
  year: 2015
  ident: ref_46
  article-title: Integration of genomic and proteomic analyses in the classification of the Siphoviridae family
  publication-title: Virology
  doi: 10.1016/j.virol.2014.10.016
– ident: ref_1
– volume: 7
  start-page: e00978-16
  year: 2016
  ident: ref_13
  article-title: The double-stranded DNA virosphere as a modular hierarchical network of gene sharing
  publication-title: MBio
  doi: 10.1128/mBio.00978-16
– volume: 17
  start-page: 132
  year: 2016
  ident: ref_50
  article-title: Mash: Fast genome and metagenome distance estimation using MinHash
  publication-title: Genome Biol.
  doi: 10.1186/s13059-016-0997-x
– volume: 40
  start-page: D306
  year: 2012
  ident: ref_58
  article-title: InterPro in 2011: New developments in the family and domain prediction database
  publication-title: Nucleic Acids Res.
  doi: 10.1093/nar/gkr948
– volume: 146
  start-page: 843
  year: 2001
  ident: ref_2
  article-title: Frequency of morphological phage descriptions in the year 2000
  publication-title: Arch. Virol.
  doi: 10.1007/s007050170120
– volume: 37
  start-page: 29
  year: 2019
  ident: ref_48
  article-title: Minimum Information about an Uncultivated Virus Genome (MIUViG)
  publication-title: Nat. Biotechnol.
  doi: 10.1038/nbt.4306
– volume: 5
  start-page: 4498
  year: 2014
  ident: ref_27
  article-title: A highly abundant bacteriophage discovered in the unknown sequences of human faecal metagenomes
  publication-title: Nat. Commun.
  doi: 10.1038/ncomms5498
– volume: 161
  start-page: 1095
  year: 2016
  ident: ref_9
  article-title: Taxonomy of prokaryotic viruses: Update from the ICTV bacterial and archaeal viruses subcommittee
  publication-title: Arch. Virol.
  doi: 10.1007/s00705-015-2728-0
– volume: 40
  start-page: D290
  year: 2012
  ident: ref_57
  article-title: The Pfam protein families database
  publication-title: Nucleic Acids Res.
  doi: 10.1093/nar/gkr1065
– volume: 31
  start-page: 3691
  year: 2015
  ident: ref_51
  article-title: Roary: Rapid large-scale prokaryote pan genome analysis
  publication-title: Bioinformatics
  doi: 10.1093/bioinformatics/btv421
– volume: 14
  start-page: 587
  year: 2017
  ident: ref_61
  article-title: ModelFinder: Fast model selection for accurate phylogenetic estimates
  publication-title: Nat. Methods
  doi: 10.1038/nmeth.4285
– volume: 159
  start-page: 406
  year: 2008
  ident: ref_7
  article-title: Unifying classical and molecular taxonomic classification: Analysis of the Podoviridae using BLASTP-based tools
  publication-title: Res. Microbiol.
  doi: 10.1016/j.resmic.2008.03.005
– volume: 4
  start-page: 693
  year: 2019
  ident: ref_30
  article-title: Megaphages infect Prevotella and variants are widespread in gut microbiomes
  publication-title: Nat. Microbiol.
  doi: 10.1038/s41564-018-0338-9
– volume: 28
  start-page: 3150
  year: 2012
  ident: ref_45
  article-title: CD-HIT: Accelerated for clustering the next-generation sequencing data
  publication-title: Bioinformatics
  doi: 10.1093/bioinformatics/bts565
– volume: 101
  start-page: 894
  year: 2020
  ident: ref_26
  article-title: ICTV virus taxonomy profile: Finnlakeviridae
  publication-title: J. Gen. Virol.
  doi: 10.1099/jgv.0.001488
– volume: 9
  start-page: 11342
  year: 2019
  ident: ref_18
  article-title: Defining a Core Genome for the Herpesvirales and Exploring their Evolutionary Relationship with the Caudovirales
  publication-title: Sci. Rep.
  doi: 10.1038/s41598-019-47742-z
– volume: 24
  start-page: 653
  year: 2018
  ident: ref_28
  article-title: Biology and Taxonomy of crAss-like Bacteriophages, the Most Abundant Virus in the Human Gut
  publication-title: Cell Host Microbe
  doi: 10.1016/j.chom.2018.10.002
– ident: ref_34
  doi: 10.1371/journal.pone.0040418
– ident: ref_40
  doi: 10.3390/antibiotics9100663
– volume: 28
  start-page: 724
  year: 2020
  ident: ref_49
  article-title: The Gut Virome Database Reveals Age-Dependent Patterns of Virome Diversity in the Human Gut
  publication-title: Cell Host Microbe
  doi: 10.1016/j.chom.2020.08.003
– volume: 39
  start-page: 29
  year: 2011
  ident: ref_56
  article-title: HMMER web server: Interactive sequence similarity searching
  publication-title: Nucleic Acids Res.
  doi: 10.1093/nar/gkr367
– ident: ref_6
  doi: 10.1201/9780203491751
– volume: 184
  start-page: 4529
  year: 2002
  ident: ref_10
  article-title: The Phage Proteomic Tree: A genome-based taxonomy for phage
  publication-title: J. Bacteriol.
  doi: 10.1128/JB.184.16.4529-4535.2002
– volume: 5
  start-page: e3243
  year: 2017
  ident: ref_14
  article-title: vConTACT: An iVirus tool to classify double-stranded DNA viruses that infect Archaea and Bacteria
  publication-title: PeerJ
  doi: 10.7717/peerj.3243
– volume: 33
  start-page: W244
  year: 2005
  ident: ref_55
  article-title: The HHpred interactive server for protein homology detection and structure prediction
  publication-title: Nucleic Acids Res.
  doi: 10.1093/nar/gki408
– volume: 37
  start-page: D205
  year: 2009
  ident: ref_59
  article-title: CDD: Specific functional annotation with the Conserved Domain Database
  publication-title: Nucleic Acids Res.
  doi: 10.1093/nar/gkn845
– volume: 37
  start-page: 632
  year: 2019
  ident: ref_15
  article-title: Taxonomic assignment of uncultivated prokaryotic virus genomes is enabled by gene-sharing networks
  publication-title: Nat. Biotechnol.
  doi: 10.1038/s41587-019-0100-8
– volume: 163
  start-page: 1125
  year: 2018
  ident: ref_20
  article-title: Taxonomy of prokaryotic viruses: 2017 update from the ICTV Bacterial and Archaeal Viruses Subcommittee
  publication-title: Arch. Virol.
  doi: 10.1007/s00705-018-3723-z
– volume: 79
  start-page: 7696
  year: 2013
  ident: ref_54
  article-title: GET_HOMOLOGUES, a versatile software package for scalable and robust microbial pangenome analysis
  publication-title: Appl. Environ. Microbiol.
  doi: 10.1128/AEM.02411-13
– ident: ref_52
  doi: 10.1186/1471-2105-12-124
– volume: 5
  start-page: 668
  year: 2020
  ident: ref_38
  article-title: The new scope of virus taxonomy: Partitioning the virosphere into 15 hierarchical ranks
  publication-title: Nat. Microbiol.
  doi: 10.1038/s41564-020-0709-x
– volume: 6
  start-page: eaay5981
  year: 2020
  ident: ref_37
  article-title: Expansion of known ssRNA phage genomes: From tens to over a thousand
  publication-title: Sci. Adv.
  doi: 10.1126/sciadv.aay5981
– volume: 32
  start-page: 268
  year: 2015
  ident: ref_60
  article-title: IQ-TREE: A fast and effective stochastic algorithm for estimating maximum-likelihood phylogenies
  publication-title: Mol. Biol. Evol.
  doi: 10.1093/molbev/msu300
– volume: 6
  start-page: 16
  year: 2013
  ident: ref_41
  article-title: CoreGenes3.5: A webserver for the determination of core genes from sets of viral and small bacterial genomes
  publication-title: BMC Res. Notes
  doi: 10.1186/1756-0500-6-140
– volume: 99
  start-page: 1331
  year: 2018
  ident: ref_17
  article-title: Evaluation of the genomic diversity of viruses infecting bacteria, archaea and eukaryotes using a common bioinformatic platform: Steps towards a unified taxonomy
  publication-title: J. Gen. Virol.
  doi: 10.1099/jgv.0.001110
– volume: 101
  start-page: 3
  year: 2020
  ident: ref_23
  article-title: ICTV Virus Taxonomy Profile: Herelleviridae
  publication-title: J. Gen. Virol.
  doi: 10.1099/jgv.0.001392
– volume: 4
  start-page: 1895
  year: 2019
  ident: ref_32
  article-title: Cryptic inoviruses revealed as pervasive in bacteria and archaea across Earth’s biomes
  publication-title: Nat. Microbiol.
  doi: 10.1038/s41564-019-0510-x
– volume: 69
  start-page: 110
  year: 2020
  ident: ref_22
  article-title: Analysis of Spounaviruses as a Case Study for the Overdue Reclassification of Tailed Phages
  publication-title: Syst. Biol.
  doi: 10.1093/sysbio/syz036
– volume: 215
  start-page: 403
  year: 1990
  ident: ref_43
  article-title: Basic local alignment search tool
  publication-title: J. Mol. Biol.
  doi: 10.1016/S0022-2836(05)80360-2
– volume: 36
  start-page: W465
  year: 2008
  ident: ref_63
  article-title: Phylogeny.fr: Robust phylogenetic analysis for the non-specialist
  publication-title: Nucleic Acids Res.
  doi: 10.1093/nar/gkn180
– volume: 47
  start-page: W256
  year: 2019
  ident: ref_42
  article-title: Interactive Tree Of Life (iTOL) v4: Recent updates and new developments
  publication-title: Nucleic Acids Res.
  doi: 10.1093/nar/gkz239
– ident: ref_3
  doi: 10.1093/oso/9780195168778.001.0001
– volume: 3
  start-page: 201
  year: 1974
  ident: ref_5
  article-title: The Present State of Phage Taxonomy
  publication-title: Intervirology
  doi: 10.1159/000149758
– ident: ref_8
  doi: 10.1186/1471-2180-9-224
– volume: 33
  start-page: 2379
  year: 2017
  ident: ref_11
  article-title: ViPTree: The viral proteomic tree server
  publication-title: Bioinformatics
  doi: 10.1093/bioinformatics/btx157
– volume: 35
  start-page: 518
  year: 2018
  ident: ref_62
  article-title: UFBoot2: Improving the ultrafast bootstrap approximation
  publication-title: Mol. Biol. Evol.
  doi: 10.1093/molbev/msx281
– ident: ref_33
  doi: 10.1371/journal.pone.0019893
– volume: 4
  start-page: 1727
  year: 2019
  ident: ref_29
  article-title: Global phylogeography and ancient evolution of the widespread human gut virus crAssphage
  publication-title: Nat. Microbiol.
  doi: 10.1038/s41564-019-0494-6
– ident: ref_36
  doi: 10.1371/journal.pbio.1002409
– volume: 165
  start-page: 1253
  year: 2020
  ident: ref_21
  article-title: Taxonomy of prokaryotic viruses: 2018–2019 update from the ICTV Bacterial and Archaeal Viruses Subcommittee
  publication-title: Arch. Virol.
  doi: 10.1007/s00705-020-04577-8
– volume: 4
  start-page: 1306
  year: 2019
  ident: ref_19
  article-title: Evaluation of a concatenated protein phylogeny for classification of tailed double-stranded DNA viruses belonging to the order Caudovirales
  publication-title: Nat. Microbiol.
  doi: 10.1038/s41564-019-0448-z
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Snippet Bacteriophage (phage) taxonomy has been in flux since its inception over four decades ago. Genome sequencing has put pressure on the classification system and...
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SubjectTerms bacteriophages
Bacteriophages - classification
Bacteriophages - genetics
Caudovirales
Communication
genome
Genome, Viral
Myoviridae
phage classification
phage taxonomy
Phylogeny
Podoviridae
Siphoviridae
taxonomy
Title A Roadmap for Genome-Based Phage Taxonomy
URI https://www.ncbi.nlm.nih.gov/pubmed/33803862
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